Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tsen54Q8C2A2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tsen54Q8C2A2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.96■□□□□ 0.47
Tsen54Q8C2A2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tsen54Q8C2A2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tsen54Q8C2A2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Tsen54Q8C2A2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tsen54Q8C2A2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tsen54Q8C2A2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Tsen54Q8C2A2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tsen54Q8C2A2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tsen54Q8C2A2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tsen54Q8C2A2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tsen54Q8C2A2 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.94■□□□□ 0.46
Tsen54Q8C2A2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tsen54Q8C2A2 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.93■□□□□ 0.46
Tsen54Q8C2A2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tsen54Q8C2A2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tsen54Q8C2A2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Tsen54Q8C2A2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tsen54Q8C2A2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tsen54Q8C2A2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tsen54Q8C2A2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tsen54Q8C2A2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tsen54Q8C2A2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tsen54Q8C2A2 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.92■□□□□ 0.46
Tsen54Q8C2A2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tsen54Q8C2A2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Tsen54Q8C2A2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.91■□□□□ 0.46
Tsen54Q8C2A2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Tsen54Q8C2A2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tsen54Q8C2A2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Tsen54Q8C2A2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tsen54Q8C2A2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tsen54Q8C2A2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tsen54Q8C2A2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Tsen54Q8C2A2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tsen54Q8C2A2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tsen54Q8C2A2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tsen54Q8C2A2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tsen54Q8C2A2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tsen54Q8C2A2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tsen54Q8C2A2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Tsen54Q8C2A2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Tsen54Q8C2A2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Tsen54Q8C2A2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tsen54Q8C2A2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tsen54Q8C2A2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tsen54Q8C2A2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tsen54Q8C2A2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tsen54Q8C2A2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tsen54Q8C2A2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tsen54Q8C2A2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tsen54Q8C2A2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tsen54Q8C2A2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tsen54Q8C2A2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tsen54Q8C2A2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tsen54Q8C2A2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Tsen54Q8C2A2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Tsen54Q8C2A2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tsen54Q8C2A2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Tsen54Q8C2A2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tsen54Q8C2A2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tsen54Q8C2A2 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.86■□□□□ 0.45
Tsen54Q8C2A2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tsen54Q8C2A2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.86■□□□□ 0.45
Tsen54Q8C2A2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tsen54Q8C2A2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Tsen54Q8C2A2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Tsen54Q8C2A2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.85■□□□□ 0.45
Tsen54Q8C2A2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tsen54Q8C2A2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tsen54Q8C2A2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Tsen54Q8C2A2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tsen54Q8C2A2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Tsen54Q8C2A2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.84■□□□□ 0.45
Tsen54Q8C2A2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.84■□□□□ 0.45
Tsen54Q8C2A2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Tsen54Q8C2A2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Tsen54Q8C2A2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Tsen54Q8C2A2 Gm37136-201ENSMUST00000194368 194 ntBASIC17.83■□□□□ 0.44
Tsen54Q8C2A2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tsen54Q8C2A2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Tsen54Q8C2A2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tsen54Q8C2A2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Tsen54Q8C2A2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tsen54Q8C2A2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.82■□□□□ 0.44
Tsen54Q8C2A2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tsen54Q8C2A2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Tsen54Q8C2A2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tsen54Q8C2A2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tsen54Q8C2A2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tsen54Q8C2A2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tsen54Q8C2A2 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.81■□□□□ 0.44
Tsen54Q8C2A2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tsen54Q8C2A2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tsen54Q8C2A2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tsen54Q8C2A2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tsen54Q8C2A2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
Tsen54Q8C2A2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms