Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Skida1Q80YR3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Skida1Q80YR3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Skida1Q80YR3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Skida1Q80YR3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Skida1Q80YR3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Skida1Q80YR3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Skida1Q80YR3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Skida1Q80YR3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Skida1Q80YR3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Skida1Q80YR3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Skida1Q80YR3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.88■□□□□ 0.93
Skida1Q80YR3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.88■□□□□ 0.93
Skida1Q80YR3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Skida1Q80YR3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Skida1Q80YR3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Skida1Q80YR3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Skida1Q80YR3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Skida1Q80YR3 Gm44645-201ENSMUST00000205492 1653 ntBASIC20.87■□□□□ 0.93
Skida1Q80YR3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Skida1Q80YR3 Gm10232-201ENSMUST00000089221 720 ntBASIC20.87■□□□□ 0.93
Skida1Q80YR3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Skida1Q80YR3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Skida1Q80YR3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Skida1Q80YR3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.87■□□□□ 0.93
Skida1Q80YR3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Skida1Q80YR3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Skida1Q80YR3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Skida1Q80YR3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Skida1Q80YR3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Skida1Q80YR3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.85■□□□□ 0.93
Skida1Q80YR3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.85■□□□□ 0.93
Skida1Q80YR3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Skida1Q80YR3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Skida1Q80YR3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Skida1Q80YR3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Skida1Q80YR3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Skida1Q80YR3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Skida1Q80YR3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.84■□□□□ 0.93
Skida1Q80YR3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.84■□□□□ 0.93
Skida1Q80YR3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.84■□□□□ 0.93
Skida1Q80YR3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Skida1Q80YR3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Skida1Q80YR3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.84■□□□□ 0.93
Skida1Q80YR3 Gm37720-201ENSMUST00000195497 1241 ntBASIC20.84■□□□□ 0.93
Skida1Q80YR3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.84■□□□□ 0.93
Skida1Q80YR3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Skida1Q80YR3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Skida1Q80YR3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Skida1Q80YR3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.84■□□□□ 0.93
Skida1Q80YR3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Skida1Q80YR3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Skida1Q80YR3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Skida1Q80YR3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Skida1Q80YR3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.83■□□□□ 0.92
Skida1Q80YR3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Skida1Q80YR3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Skida1Q80YR3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Skida1Q80YR3 Gm45878-201ENSMUST00000211839 241 ntBASIC20.82■□□□□ 0.92
Skida1Q80YR3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.82■□□□□ 0.92
Skida1Q80YR3 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC20.82■□□□□ 0.92
Skida1Q80YR3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Skida1Q80YR3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Skida1Q80YR3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Skida1Q80YR3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Skida1Q80YR3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Skida1Q80YR3 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Skida1Q80YR3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Skida1Q80YR3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Skida1Q80YR3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Skida1Q80YR3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Skida1Q80YR3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Skida1Q80YR3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.8■□□□□ 0.92
Skida1Q80YR3 Gm17872-201ENSMUST00000222550 532 ntBASIC20.8■□□□□ 0.92
Skida1Q80YR3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Skida1Q80YR3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Skida1Q80YR3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Skida1Q80YR3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Skida1Q80YR3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Skida1Q80YR3 Gm20614-201ENSMUST00000177106 632 ntBASIC20.79■□□□□ 0.92
Skida1Q80YR3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Skida1Q80YR3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Skida1Q80YR3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Skida1Q80YR3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Skida1Q80YR3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Skida1Q80YR3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC20.78■□□□□ 0.92
Skida1Q80YR3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Skida1Q80YR3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Skida1Q80YR3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.78■□□□□ 0.92
Skida1Q80YR3 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Skida1Q80YR3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Skida1Q80YR3 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Skida1Q80YR3 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC20.77■□□□□ 0.92
Skida1Q80YR3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.77■□□□□ 0.92
Skida1Q80YR3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Skida1Q80YR3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Skida1Q80YR3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Skida1Q80YR3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Skida1Q80YR3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.76■□□□□ 0.91
Skida1Q80YR3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 173.4 ms