Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gbx1P82976 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gbx1P82976 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.28■□□□□ 0.84
Gbx1P82976 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gbx1P82976 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Gbx1P82976 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gbx1P82976 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Gbx1P82976 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Gbx1P82976 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Gbx1P82976 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
Gbx1P82976 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gbx1P82976 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gbx1P82976 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gbx1P82976 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.27■□□□□ 0.84
Gbx1P82976 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.27■□□□□ 0.84
Gbx1P82976 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gbx1P82976 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gbx1P82976 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gbx1P82976 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gbx1P82976 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gbx1P82976 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.26■□□□□ 0.83
Gbx1P82976 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Gbx1P82976 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gbx1P82976 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gbx1P82976 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Gbx1P82976 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Gbx1P82976 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Gbx1P82976 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gbx1P82976 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gbx1P82976 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gbx1P82976 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gbx1P82976 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gbx1P82976 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gbx1P82976 Gm11687-201ENSMUST00000118911 886 ntBASIC20.25■□□□□ 0.83
Gbx1P82976 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gbx1P82976 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gbx1P82976 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Gbx1P82976 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.25■□□□□ 0.83
Gbx1P82976 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Gbx1P82976 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Gbx1P82976 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Gbx1P82976 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Gbx1P82976 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gbx1P82976 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gbx1P82976 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gbx1P82976 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.23■□□□□ 0.83
Gbx1P82976 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gbx1P82976 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gbx1P82976 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gbx1P82976 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gbx1P82976 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gbx1P82976 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Gbx1P82976 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Gbx1P82976 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.22■□□□□ 0.83
Gbx1P82976 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gbx1P82976 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.22■□□□□ 0.83
Gbx1P82976 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gbx1P82976 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gbx1P82976 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
Gbx1P82976 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.2■□□□□ 0.82
Gbx1P82976 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.2■□□□□ 0.82
Gbx1P82976 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Gbx1P82976 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gbx1P82976 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gbx1P82976 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gbx1P82976 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gbx1P82976 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gbx1P82976 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gbx1P82976 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.19■□□□□ 0.82
Gbx1P82976 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gbx1P82976 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.19■□□□□ 0.82
Gbx1P82976 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gbx1P82976 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gbx1P82976 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gbx1P82976 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gbx1P82976 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gbx1P82976 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gbx1P82976 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gbx1P82976 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Gbx1P82976 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Gbx1P82976 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gbx1P82976 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gbx1P82976 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Gbx1P82976 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.16■□□□□ 0.82
Gbx1P82976 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Gbx1P82976 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gbx1P82976 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Gbx1P82976 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gbx1P82976 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gbx1P82976 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Gbx1P82976 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gbx1P82976 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gbx1P82976 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gbx1P82976 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gbx1P82976 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gbx1P82976 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Gbx1P82976 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gbx1P82976 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Gbx1P82976 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gbx1P82976 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms