Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 SUP17tS(UGA)I 82 nt7.18□□□□□ -1.26
RPN11P43588 SUP16tS(UGA)P 82 nt7.18□□□□□ -1.26
RPN11P43588 MRPL4YLR439W 960 nt7.18□□□□□ -1.26
RPN11P43588 BBP1YPL255W 1158 nt7.18□□□□□ -1.26
RPN11P43588 YTH1YPR107C 627 nt7.18□□□□□ -1.26
RPN11P43588 YHR131CYHR131C 2553 nt7.18□□□□□ -1.26
RPN11P43588 APE3YBR286W 1614 nt7.18□□□□□ -1.26
RPN11P43588 AIM34YMR003W 597 nt7.17□□□□□ -1.26
RPN11P43588 YBR016WYBR016W 387 nt7.17□□□□□ -1.26
RPN11P43588 RPL5YPL131W 894 nt7.17□□□□□ -1.26
RPN11P43588 MMP1YLL061W 1752 nt7.17□□□□□ -1.26
RPN11P43588 TFS1YLR178C 660 nt7.16□□□□□ -1.26
RPN11P43588 RPN6YDL097C 1305 nt7.16□□□□□ -1.26
RPN11P43588 YDR109CYDR109C 2148 nt7.16□□□□□ -1.26
RPN11P43588 ITR1YDR497C 1755 nt7.15□□□□□ -1.26
RPN11P43588 UTR2YEL040W 1404 nt7.15□□□□□ -1.27
RPN11P43588 GSH1YJL101C 2037 nt7.15□□□□□ -1.27
RPN11P43588 ARO2YGL148W 1131 nt7.14□□□□□ -1.27
RPN11P43588 YML133CYML133C 4125 nt7.14□□□□□ -1.27
RPN11P43588 RPL21AYBR191W 483 nt7.14□□□□□ -1.27
RPN11P43588 CAD1YDR423C 1230 nt7.13□□□□□ -1.27
RPN11P43588 FAF1YIL019W 1041 nt7.13□□□□□ -1.27
RPN11P43588 COS9YKL219W 1224 nt7.13□□□□□ -1.27
RPN11P43588 YOL097W-AYOL097W-A 186 nt7.13□□□□□ -1.27
RPN11P43588 OST3YOR085W 1053 nt7.13□□□□□ -1.27
RPN11P43588 VRP1YLR337C 2454 nt7.13□□□□□ -1.27
RPN11P43588 CBK1YNL161W 2271 nt7.13□□□□□ -1.27
RPN11P43588 KKQ8YKL168C 2175 nt7.12□□□□□ -1.27
RPN11P43588 COX26YDR119W-A 201 nt7.12□□□□□ -1.27
RPN11P43588 YLR173WYLR173W 1827 nt7.12□□□□□ -1.27
RPN11P43588 YPL277CYPL277C 1464 nt7.11□□□□□ -1.27
RPN11P43588 JAC1YGL018C 555 nt7.11□□□□□ -1.27
RPN11P43588 APS3YJL024C 585 nt7.11□□□□□ -1.27
RPN11P43588 MTQ1YNL063W 945 nt7.11□□□□□ -1.27
RPN11P43588 CYB2YML054C 1776 nt7.1□□□□□ -1.27
RPN11P43588 SNU66YOR308C 1764 nt7.1□□□□□ -1.27
RPN11P43588 PRP46YPL151C 1356 nt7.1□□□□□ -1.27
RPN11P43588 SUF5tG(CCC)O 72 nt7.1□□□□□ -1.27
RPN11P43588 DJP1YIR004W 1299 nt7.09□□□□□ -1.27
RPN11P43588 MGM101YJR144W 810 nt7.09□□□□□ -1.27
RPN11P43588 SPE4YLR146C 903 nt7.09□□□□□ -1.27
RPN11P43588 PIN2YOR104W 849 nt7.09□□□□□ -1.27
RPN11P43588 LPD1YFL018C 1500 nt7.09□□□□□ -1.27
RPN11P43588 YEL009C-AYEL009C-A 408 nt7.08□□□□□ -1.28
RPN11P43588 YGL235WYGL235W 537 nt7.08□□□□□ -1.28
RPN11P43588 tN(GUU)CtN(GUU)C 74 nt7.08□□□□□ -1.28
RPN11P43588 tN(GUU)FtN(GUU)F 74 nt7.08□□□□□ -1.28
RPN11P43588 tN(GUU)GtN(GUU)G 74 nt7.08□□□□□ -1.28
RPN11P43588 tN(GUU)KtN(GUU)K 74 nt7.08□□□□□ -1.28
RPN11P43588 tN(GUU)LtN(GUU)L 74 nt7.08□□□□□ -1.28
RPN11P43588 tN(GUU)N1tN(GUU)N1 74 nt7.08□□□□□ -1.28
RPN11P43588 tN(GUU)N2tN(GUU)N2 74 nt7.08□□□□□ -1.28
RPN11P43588 tN(GUU)O1tN(GUU)O1 74 nt7.08□□□□□ -1.28
RPN11P43588 tN(GUU)O2tN(GUU)O2 74 nt7.08□□□□□ -1.28
RPN11P43588 tN(GUU)PtN(GUU)P 74 nt7.08□□□□□ -1.28
RPN11P43588 YIR042CYIR042C 711 nt7.08□□□□□ -1.28
RPN11P43588 YBR124WYBR124W 360 nt7.08□□□□□ -1.28
RPN11P43588 GYP8YFL027C 1494 nt7.07□□□□□ -1.28
RPN11P43588 PAC10YGR078C 600 nt7.07□□□□□ -1.28
RPN11P43588 YJR012CYJR012C 624 nt7.07□□□□□ -1.28
RPN11P43588 GIT1YCR098C 1557 nt7.07□□□□□ -1.28
RPN11P43588 FAA4YMR246W 2085 nt7.07□□□□□ -1.28
RPN11P43588 HIS7YBR248C 1659 nt7.06□□□□□ -1.28
RPN11P43588 MIM2YLR099W-A 264 nt7.06□□□□□ -1.28
RPN11P43588 ETR1YBR026C 1143 nt7.06□□□□□ -1.28
RPN11P43588 AGP2YBR132C 1791 nt7.05□□□□□ -1.28
RPN11P43588 CHA1YCL064C 1083 nt7.05□□□□□ -1.28
RPN11P43588 NTG1YAL015C 1200 nt7.05□□□□□ -1.28
RPN11P43588 GDT1YBR187W 843 nt7.05□□□□□ -1.28
RPN11P43588 MCM3YEL032W 2916 nt7.05□□□□□ -1.28
RPN11P43588 PGM1YKL127W 1713 nt7.04□□□□□ -1.28
RPN11P43588 LAS17YOR181W 1902 nt7.04□□□□□ -1.28
RPN11P43588 PGK1YCR012W 1251 nt7.04□□□□□ -1.28
RPN11P43588 YER137CYER137C 447 nt7.04□□□□□ -1.28
RPN11P43588 IPI1YHR085W 1005 nt7.04□□□□□ -1.28
RPN11P43588 RPL3YOR063W 1164 nt7.04□□□□□ -1.28
RPN11P43588 CSG2YBR036C 1233 nt7.04□□□□□ -1.28
RPN11P43588 YJU3YKL094W 942 nt7.03□□□□□ -1.28
RPN11P43588 YNL190WYNL190W 615 nt7.03□□□□□ -1.28
RPN11P43588 TOM71YHR117W 1920 nt7.03□□□□□ -1.28
RPN11P43588 TRR1YDR353W 960 nt7.02□□□□□ -1.29
RPN11P43588 YLL059CYLL059C 507 nt7.02□□□□□ -1.29
RPN11P43588 VID30YGL227W 2877 nt7.01□□□□□ -1.29
RPN11P43588 ATG22YCL038C 1587 nt7.01□□□□□ -1.29
RPN11P43588 HHY1YEL059W 309 nt7.01□□□□□ -1.29
RPN11P43588 RPB4YJL140W 666 nt7.01□□□□□ -1.29
RPN11P43588 OAZ1YPL052W 879 nt7.01□□□□□ -1.29
RPN11P43588 IES1YFL013C 2079 nt7□□□□□ -1.29
RPN11P43588 MLF3YNL074C 1359 nt7□□□□□ -1.29
RPN11P43588 YMR105W-AYMR105W-A 195 nt7□□□□□ -1.29
RPN11P43588 CBC2YPL178W 627 nt7□□□□□ -1.29
RPN11P43588 FRS2YFL022C 1512 nt7□□□□□ -1.29
RPN11P43588 EMP46YLR080W 1335 nt7□□□□□ -1.29
RPN11P43588 RPT3YDR394W 1287 nt6.99□□□□□ -1.29
RPN11P43588 YHR127WYHR127W 732 nt6.99□□□□□ -1.29
RPN11P43588 COA1YIL157C 594 nt6.99□□□□□ -1.29
RPN11P43588 BSC4YNL269W 396 nt6.99□□□□□ -1.29
RPN11P43588 SER1YOR184W 1188 nt6.99□□□□□ -1.29
RPN11P43588 ATO3YDR384C 828 nt6.98□□□□□ -1.29
RPN11P43588 COX5AYNL052W 462 nt6.98□□□□□ -1.29
Retrieved 100 of 7,029 protein–RNA pairs in 24.7 ms