Protein–RNA interactions for Protein: P01800

Ig heavy chain V-III region T957, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01800 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
P01800 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01800 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
P01800 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01800 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01800 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01800 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01800 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
P01800 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01800 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
P01800 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
P01800 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
P01800 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
P01800 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.83■□□□□ 0.6
P01800 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
P01800 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01800 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
P01800 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01800 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01800 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
P01800 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
P01800 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
P01800 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.82■□□□□ 0.6
P01800 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.82■□□□□ 0.6
P01800 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01800 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
P01800 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.81■□□□□ 0.6
P01800 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.81■□□□□ 0.6
P01800 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
P01800 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
P01800 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01800 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
P01800 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01800 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01800 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
P01800 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01800 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01800 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01800 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
P01800 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.8■□□□□ 0.6
P01800 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
P01800 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01800 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01800 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
P01800 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
P01800 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
P01800 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01800 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01800 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01800 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01800 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
P01800 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01800 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01800 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01800 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.78■□□□□ 0.6
P01800 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.78■□□□□ 0.6
P01800 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01800 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
P01800 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01800 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01800 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.78■□□□□ 0.6
P01800 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01800 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01800 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
P01800 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
P01800 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
P01800 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P01800 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P01800 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.59
P01800 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
P01800 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.76■□□□□ 0.59
P01800 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
P01800 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01800 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01800 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
P01800 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P01800 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
P01800 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
P01800 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
P01800 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P01800 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
P01800 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01800 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01800 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01800 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
P01800 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01800 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01800 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.74■□□□□ 0.59
P01800 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.74■□□□□ 0.59
P01800 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
P01800 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01800 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.74■□□□□ 0.59
P01800 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01800 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
P01800 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01800 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
P01800 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
P01800 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01800 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.73■□□□□ 0.59
P01800 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms