Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Matn3O35701 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Matn3O35701 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Matn3O35701 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Matn3O35701 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Matn3O35701 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Matn3O35701 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Matn3O35701 Gm22567-201ENSMUST00000175542 342 ntBASIC19.57■□□□□ 0.72
Matn3O35701 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Matn3O35701 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Matn3O35701 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Matn3O35701 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Matn3O35701 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Matn3O35701 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Matn3O35701 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Matn3O35701 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Matn3O35701 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Matn3O35701 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Matn3O35701 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Matn3O35701 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Matn3O35701 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Matn3O35701 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Matn3O35701 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.54■□□□□ 0.72
Matn3O35701 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Matn3O35701 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Matn3O35701 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Matn3O35701 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Matn3O35701 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Matn3O35701 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Matn3O35701 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Matn3O35701 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Matn3O35701 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Matn3O35701 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
Matn3O35701 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Matn3O35701 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Matn3O35701 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.52■□□□□ 0.72
Matn3O35701 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Matn3O35701 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Matn3O35701 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Matn3O35701 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Matn3O35701 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Matn3O35701 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Matn3O35701 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Matn3O35701 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Matn3O35701 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Matn3O35701 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Matn3O35701 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Matn3O35701 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Matn3O35701 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Matn3O35701 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Matn3O35701 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Matn3O35701 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Matn3O35701 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Matn3O35701 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.49■□□□□ 0.71
Matn3O35701 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Matn3O35701 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Matn3O35701 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Matn3O35701 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Matn3O35701 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Matn3O35701 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Matn3O35701 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Matn3O35701 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Matn3O35701 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.48■□□□□ 0.71
Matn3O35701 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Matn3O35701 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Matn3O35701 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Matn3O35701 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Matn3O35701 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Matn3O35701 Iqck-206ENSMUST00000208658 2891 ntBASIC19.47■□□□□ 0.71
Matn3O35701 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Matn3O35701 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Matn3O35701 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Matn3O35701 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Matn3O35701 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Matn3O35701 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Matn3O35701 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Matn3O35701 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Matn3O35701 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Matn3O35701 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Matn3O35701 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Matn3O35701 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Matn3O35701 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Matn3O35701 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
Matn3O35701 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Matn3O35701 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Matn3O35701 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Matn3O35701 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Matn3O35701 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Matn3O35701 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Matn3O35701 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Matn3O35701 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.44■□□□□ 0.7
Matn3O35701 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Matn3O35701 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.43■□□□□ 0.7
Matn3O35701 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.43■□□□□ 0.7
Matn3O35701 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Matn3O35701 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Matn3O35701 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Matn3O35701 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.43■□□□□ 0.7
Matn3O35701 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Matn3O35701 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms