Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Sptbn4E9PX29 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sptbn4E9PX29 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sptbn4E9PX29 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Sptbn4E9PX29 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.12■□□□□ 0.81
Sptbn4E9PX29 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sptbn4E9PX29 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sptbn4E9PX29 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.12■□□□□ 0.81
Sptbn4E9PX29 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sptbn4E9PX29 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sptbn4E9PX29 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sptbn4E9PX29 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sptbn4E9PX29 Gm10849-201ENSMUST00000100397 618 ntBASIC20.11■□□□□ 0.81
Sptbn4E9PX29 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sptbn4E9PX29 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.1■□□□□ 0.81
Sptbn4E9PX29 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.1■□□□□ 0.81
Sptbn4E9PX29 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Sptbn4E9PX29 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
Sptbn4E9PX29 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sptbn4E9PX29 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sptbn4E9PX29 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.09■□□□□ 0.81
Sptbn4E9PX29 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sptbn4E9PX29 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Sptbn4E9PX29 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Sptbn4E9PX29 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sptbn4E9PX29 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sptbn4E9PX29 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sptbn4E9PX29 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sptbn4E9PX29 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sptbn4E9PX29 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sptbn4E9PX29 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sptbn4E9PX29 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sptbn4E9PX29 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sptbn4E9PX29 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sptbn4E9PX29 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Sptbn4E9PX29 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sptbn4E9PX29 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sptbn4E9PX29 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.06■□□□□ 0.8
Sptbn4E9PX29 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sptbn4E9PX29 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Sptbn4E9PX29 Spcs1-204ENSMUST00000226782 949 ntBASIC20.06■□□□□ 0.8
Sptbn4E9PX29 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sptbn4E9PX29 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.05■□□□□ 0.8
Sptbn4E9PX29 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sptbn4E9PX29 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sptbn4E9PX29 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.05■□□□□ 0.8
Sptbn4E9PX29 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.05■□□□□ 0.8
Sptbn4E9PX29 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sptbn4E9PX29 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Sptbn4E9PX29 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sptbn4E9PX29 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sptbn4E9PX29 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.04■□□□□ 0.8
Sptbn4E9PX29 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.04■□□□□ 0.8
Sptbn4E9PX29 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.04■□□□□ 0.8
Sptbn4E9PX29 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Sptbn4E9PX29 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sptbn4E9PX29 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sptbn4E9PX29 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sptbn4E9PX29 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sptbn4E9PX29 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.02■□□□□ 0.8
Sptbn4E9PX29 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.02■□□□□ 0.8
Sptbn4E9PX29 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Sptbn4E9PX29 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sptbn4E9PX29 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
Sptbn4E9PX29 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sptbn4E9PX29 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.01■□□□□ 0.79
Sptbn4E9PX29 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sptbn4E9PX29 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20■□□□□ 0.79
Sptbn4E9PX29 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sptbn4E9PX29 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20■□□□□ 0.79
Sptbn4E9PX29 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sptbn4E9PX29 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sptbn4E9PX29 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20■□□□□ 0.79
Sptbn4E9PX29 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sptbn4E9PX29 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sptbn4E9PX29 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
Sptbn4E9PX29 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sptbn4E9PX29 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
Sptbn4E9PX29 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sptbn4E9PX29 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.98■□□□□ 0.79
Sptbn4E9PX29 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sptbn4E9PX29 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sptbn4E9PX29 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sptbn4E9PX29 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sptbn4E9PX29 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.98■□□□□ 0.79
Sptbn4E9PX29 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.98■□□□□ 0.79
Sptbn4E9PX29 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.98■□□□□ 0.79
Sptbn4E9PX29 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sptbn4E9PX29 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Sptbn4E9PX29 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sptbn4E9PX29 Gm37179-201ENSMUST00000194862 823 ntBASIC19.97■□□□□ 0.79
Sptbn4E9PX29 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sptbn4E9PX29 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sptbn4E9PX29 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sptbn4E9PX29 Mir7075-201ENSMUST00000184187 82 ntBASIC19.97■□□□□ 0.79
Sptbn4E9PX29 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sptbn4E9PX29 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sptbn4E9PX29 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sptbn4E9PX29 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sptbn4E9PX29 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms