Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.98■□□□□ 0.31
NOTCH4Q99466 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH4Q99466 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.98■□□□□ 0.31
NOTCH4Q99466 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.98■□□□□ 0.31
NOTCH4Q99466 AC116165.1-201ENST00000611806 668 ntBASIC16.98■□□□□ 0.31
NOTCH4Q99466 MIR6752-201ENST00000618442 71 ntBASIC16.98■□□□□ 0.31
NOTCH4Q99466 AC004461.2-201ENST00000629517 803 ntBASIC16.98■□□□□ 0.31
NOTCH4Q99466 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.98■□□□□ 0.31
NOTCH4Q99466 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
NOTCH4Q99466 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH4Q99466 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.98■□□□□ 0.31
NOTCH4Q99466 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.98■□□□□ 0.31
NOTCH4Q99466 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
NOTCH4Q99466 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
NOTCH4Q99466 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH4Q99466 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
NOTCH4Q99466 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH4Q99466 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.98■□□□□ 0.31
NOTCH4Q99466 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NOTCH4Q99466 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.97■□□□□ 0.31
NOTCH4Q99466 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.97■□□□□ 0.31
NOTCH4Q99466 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NOTCH4Q99466 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.97■□□□□ 0.31
NOTCH4Q99466 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.97■□□□□ 0.31
NOTCH4Q99466 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.97■□□□□ 0.31
NOTCH4Q99466 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NOTCH4Q99466 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.97■□□□□ 0.31
NOTCH4Q99466 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.97■□□□□ 0.31
NOTCH4Q99466 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.97■□□□□ 0.31
NOTCH4Q99466 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NOTCH4Q99466 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NOTCH4Q99466 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.97■□□□□ 0.31
NOTCH4Q99466 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NOTCH4Q99466 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.97■□□□□ 0.31
NOTCH4Q99466 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NOTCH4Q99466 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.97■□□□□ 0.31
NOTCH4Q99466 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NOTCH4Q99466 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NOTCH4Q99466 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NOTCH4Q99466 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NOTCH4Q99466 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NOTCH4Q99466 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.97■□□□□ 0.31
NOTCH4Q99466 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.97■□□□□ 0.31
NOTCH4Q99466 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NOTCH4Q99466 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.97■□□□□ 0.31
NOTCH4Q99466 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NOTCH4Q99466 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NOTCH4Q99466 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NOTCH4Q99466 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.97■□□□□ 0.31
NOTCH4Q99466 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.97■□□□□ 0.31
NOTCH4Q99466 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.97■□□□□ 0.31
NOTCH4Q99466 TPRX2P-201ENST00000535362 881 ntBASIC16.97■□□□□ 0.31
NOTCH4Q99466 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NOTCH4Q99466 AC092337.1-201ENST00000568699 1129 ntBASIC16.97■□□□□ 0.31
NOTCH4Q99466 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NOTCH4Q99466 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NOTCH4Q99466 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
NOTCH4Q99466 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
NOTCH4Q99466 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NOTCH4Q99466 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NOTCH4Q99466 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
NOTCH4Q99466 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NOTCH4Q99466 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.96■□□□□ 0.31
NOTCH4Q99466 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NOTCH4Q99466 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NOTCH4Q99466 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NOTCH4Q99466 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NOTCH4Q99466 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.96■□□□□ 0.31
NOTCH4Q99466 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NOTCH4Q99466 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NOTCH4Q99466 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NOTCH4Q99466 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.96■□□□□ 0.31
NOTCH4Q99466 TMEM14DP-201ENST00000422205 345 ntBASIC16.96■□□□□ 0.31
NOTCH4Q99466 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
NOTCH4Q99466 AC093004.1-201ENST00000508850 424 ntBASIC16.96■□□□□ 0.31
NOTCH4Q99466 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.96■□□□□ 0.31
NOTCH4Q99466 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.96■□□□□ 0.31
NOTCH4Q99466 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NOTCH4Q99466 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NOTCH4Q99466 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NOTCH4Q99466 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.96■□□□□ 0.31
NOTCH4Q99466 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NOTCH4Q99466 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NOTCH4Q99466 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NOTCH4Q99466 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NOTCH4Q99466 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.96■□□□□ 0.31
NOTCH4Q99466 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.96■□□□□ 0.31
NOTCH4Q99466 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
NOTCH4Q99466 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NOTCH4Q99466 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.96■□□□□ 0.3
NOTCH4Q99466 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.96■□□□□ 0.3
NOTCH4Q99466 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.96■□□□□ 0.3
NOTCH4Q99466 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.96■□□□□ 0.3
NOTCH4Q99466 AC055876.2-201ENST00000531834 546 ntBASIC16.96■□□□□ 0.3
NOTCH4Q99466 SNX29P1-201ENST00000548357 1007 ntBASIC16.96■□□□□ 0.3
NOTCH4Q99466 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.96■□□□□ 0.3
NOTCH4Q99466 AC020765.3-201ENST00000613051 740 ntBASIC16.96■□□□□ 0.3
NOTCH4Q99466 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.96■□□□□ 0.3
NOTCH4Q99466 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.96■□□□□ 0.3
NOTCH4Q99466 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms