Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNX27Q96L92 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SNX27Q96L92 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
SNX27Q96L92 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SNX27Q96L92 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNX27Q96L92 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNX27Q96L92 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNX27Q96L92 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SNX27Q96L92 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SNX27Q96L92 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNX27Q96L92 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.96■□□□□ 0.47
SNX27Q96L92 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNX27Q96L92 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNX27Q96L92 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNX27Q96L92 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.96■□□□□ 0.47
SNX27Q96L92 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNX27Q96L92 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNX27Q96L92 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SNX27Q96L92 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SNX27Q96L92 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.96■□□□□ 0.47
SNX27Q96L92 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.96■□□□□ 0.47
SNX27Q96L92 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.96■□□□□ 0.47
SNX27Q96L92 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.96■□□□□ 0.47
SNX27Q96L92 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.96■□□□□ 0.47
SNX27Q96L92 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNX27Q96L92 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
SNX27Q96L92 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNX27Q96L92 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNX27Q96L92 SLC25A39P2-201ENST00000537614 270 ntBASIC17.96■□□□□ 0.47
SNX27Q96L92 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.96■□□□□ 0.47
SNX27Q96L92 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.96■□□□□ 0.47
SNX27Q96L92 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.96■□□□□ 0.47
SNX27Q96L92 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNX27Q96L92 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.96■□□□□ 0.47
SNX27Q96L92 AJ011932.1-201ENST00000621707 465 ntBASIC17.96■□□□□ 0.47
SNX27Q96L92 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNX27Q96L92 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNX27Q96L92 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
SNX27Q96L92 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNX27Q96L92 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNX27Q96L92 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNX27Q96L92 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SNX27Q96L92 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNX27Q96L92 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SNX27Q96L92 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SNX27Q96L92 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SNX27Q96L92 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
SNX27Q96L92 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.96■□□□□ 0.46
SNX27Q96L92 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.95■□□□□ 0.46
SNX27Q96L92 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX27Q96L92 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX27Q96L92 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNX27Q96L92 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.95■□□□□ 0.46
SNX27Q96L92 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.95■□□□□ 0.46
SNX27Q96L92 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SNX27Q96L92 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX27Q96L92 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.95■□□□□ 0.46
SNX27Q96L92 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX27Q96L92 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX27Q96L92 MIR346-201ENST00000362234 95 ntBASIC17.95■□□□□ 0.46
SNX27Q96L92 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.95■□□□□ 0.46
SNX27Q96L92 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.95■□□□□ 0.46
SNX27Q96L92 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.95■□□□□ 0.46
SNX27Q96L92 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.95■□□□□ 0.46
SNX27Q96L92 AC004449.1-201ENST00000564240 433 ntBASIC17.95■□□□□ 0.46
SNX27Q96L92 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.95■□□□□ 0.46
SNX27Q96L92 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.95■□□□□ 0.46
SNX27Q96L92 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.95■□□□□ 0.46
SNX27Q96L92 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.95■□□□□ 0.46
SNX27Q96L92 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.95■□□□□ 0.46
SNX27Q96L92 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX27Q96L92 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX27Q96L92 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.95■□□□□ 0.46
SNX27Q96L92 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNX27Q96L92 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX27Q96L92 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX27Q96L92 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SNX27Q96L92 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.95■□□□□ 0.46
SNX27Q96L92 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNX27Q96L92 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNX27Q96L92 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNX27Q96L92 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.95■□□□□ 0.46
SNX27Q96L92 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.95■□□□□ 0.46
SNX27Q96L92 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX27Q96L92 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNX27Q96L92 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNX27Q96L92 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNX27Q96L92 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX27Q96L92 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX27Q96L92 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX27Q96L92 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX27Q96L92 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.94■□□□□ 0.46
SNX27Q96L92 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX27Q96L92 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNX27Q96L92 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
SNX27Q96L92 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.94■□□□□ 0.46
SNX27Q96L92 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNX27Q96L92 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.94■□□□□ 0.46
SNX27Q96L92 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
SNX27Q96L92 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms