Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Col23a1Q8K4G2 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col23a1Q8K4G2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col23a1Q8K4G2 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col23a1Q8K4G2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Col23a1Q8K4G2 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col23a1Q8K4G2 AC096628.2-201ENSMUST00000225443 1413 ntBASIC16.45■□□□□ 0.22
Col23a1Q8K4G2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col23a1Q8K4G2 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Gm8885-201ENSMUST00000189382 598 ntBASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 D9Wsu149-201ENSMUST00000214169 594 ntBASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 AC069562.3-201ENSMUST00000225387 587 ntBASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Col23a1Q8K4G2 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Gm26361-201ENSMUST00000158868 186 ntBASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Gm2546-201ENSMUST00000182630 991 ntBASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Gm27438-201ENSMUST00000183480 110 ntBASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col23a1Q8K4G2 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms