Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 AC006277.1-201ENST00000624348 1610 ntBASIC18.59■□□□□ 0.57
TRIM50Q86XT4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM50Q86XT4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM50Q86XT4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM50Q86XT4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.58■□□□□ 0.57
TRIM50Q86XT4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.58■□□□□ 0.57
TRIM50Q86XT4 SNX33P1-201ENST00000592116 1762 ntBASIC18.58■□□□□ 0.57
TRIM50Q86XT4 FO538757.1-201ENST00000623083 1397 ntBASIC18.58■□□□□ 0.57
TRIM50Q86XT4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM50Q86XT4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.58■□□□□ 0.57
TRIM50Q86XT4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
TRIM50Q86XT4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM50Q86XT4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM50Q86XT4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.58■□□□□ 0.56
TRIM50Q86XT4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM50Q86XT4 TREML5P-201ENST00000421694 576 ntBASIC18.58■□□□□ 0.56
TRIM50Q86XT4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.58■□□□□ 0.56
TRIM50Q86XT4 AC055876.3-201ENST00000431496 288 ntBASIC18.58■□□□□ 0.56
TRIM50Q86XT4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.58■□□□□ 0.56
TRIM50Q86XT4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.58■□□□□ 0.56
TRIM50Q86XT4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.58■□□□□ 0.56
TRIM50Q86XT4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.58■□□□□ 0.56
TRIM50Q86XT4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.58■□□□□ 0.56
TRIM50Q86XT4 AC138649.4-201ENST00000612222 287 ntBASIC18.58■□□□□ 0.56
TRIM50Q86XT4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM50Q86XT4 AL023806.1-201ENST00000603994 1649 ntBASIC18.58■□□□□ 0.56
TRIM50Q86XT4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM50Q86XT4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM50Q86XT4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM50Q86XT4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.58■□□□□ 0.56
TRIM50Q86XT4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM50Q86XT4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM50Q86XT4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM50Q86XT4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.57■□□□□ 0.56
TRIM50Q86XT4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM50Q86XT4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 FOXO1B-201ENST00000504678 1527 ntBASIC18.56■□□□□ 0.56
TRIM50Q86XT4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms