Protein–RNA interactions for Protein: Q7RTZ2

USP17L1, Ubiquitin carboxyl-terminal hydrolase 17-like protein 1, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L1Q7RTZ2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.02■□□□□ 0.8
USP17L1Q7RTZ2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP17L1Q7RTZ2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP17L1Q7RTZ2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.02■□□□□ 0.79
USP17L1Q7RTZ2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.02■□□□□ 0.79
USP17L1Q7RTZ2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP17L1Q7RTZ2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.02■□□□□ 0.79
USP17L1Q7RTZ2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
USP17L1Q7RTZ2 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.02■□□□□ 0.79
USP17L1Q7RTZ2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
USP17L1Q7RTZ2 LINC02012-201ENST00000608206 1725 ntBASIC20.02■□□□□ 0.79
USP17L1Q7RTZ2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.02■□□□□ 0.79
USP17L1Q7RTZ2 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.02■□□□□ 0.79
USP17L1Q7RTZ2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 AC106820.2-201ENST00000563775 3264 ntBASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 AL132655.2-201ENST00000596276 594 ntBASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 AC013467.2-201ENST00000605472 835 ntBASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 AL133215.2-201ENST00000609242 977 ntBASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 AC004840.1-201ENST00000636359 365 ntBASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 AC006277.1-201ENST00000624348 1610 ntBASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP17L1Q7RTZ2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 AC092053.1-201ENST00000605787 1936 ntBASIC20■□□□□ 0.79
USP17L1Q7RTZ2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 AL353779.1-201ENST00000434793 351 ntBASIC20■□□□□ 0.79
USP17L1Q7RTZ2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 RNA5SP410-201ENST00000516285 106 ntBASIC20■□□□□ 0.79
USP17L1Q7RTZ2 API5-211ENST00000534695 560 ntTSL 5 BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 RNA5-8SN1-201ENST00000610460 153 ntBASIC20■□□□□ 0.79
USP17L1Q7RTZ2 RNA5-8SN5-202ENST00000612463 153 ntBASIC20■□□□□ 0.79
USP17L1Q7RTZ2 RNA5-8SN4-201ENST00000613359 153 ntBASIC20■□□□□ 0.79
USP17L1Q7RTZ2 RNA5-8SN5-201ENST00000619471 153 ntBASIC20■□□□□ 0.79
USP17L1Q7RTZ2 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
USP17L1Q7RTZ2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP17L1Q7RTZ2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP17L1Q7RTZ2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP17L1Q7RTZ2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USP17L1Q7RTZ2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP17L1Q7RTZ2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
USP17L1Q7RTZ2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms