Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTC1Q2NKJ3 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.83■□□□□ 0.44
CTC1Q2NKJ3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTC1Q2NKJ3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.83■□□□□ 0.44
CTC1Q2NKJ3 AC027369.6-201ENST00000525520 931 ntBASIC17.83■□□□□ 0.44
CTC1Q2NKJ3 AC027307.2-201ENST00000591252 911 ntBASIC17.83■□□□□ 0.44
CTC1Q2NKJ3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTC1Q2NKJ3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTC1Q2NKJ3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTC1Q2NKJ3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.83■□□□□ 0.44
CTC1Q2NKJ3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.83■□□□□ 0.44
CTC1Q2NKJ3 UBALD1-205ENST00000590891 2641 ntBASIC17.83■□□□□ 0.44
CTC1Q2NKJ3 AC022144.1-201ENST00000602255 1580 ntBASIC17.83■□□□□ 0.44
CTC1Q2NKJ3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.44
CTC1Q2NKJ3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 KRT18P55-202ENST00000578578 1546 ntBASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 AC004233.3-201ENST00000607794 1269 ntBASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.82■□□□□ 0.44
CTC1Q2NKJ3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 KRT17P7-201ENST00000451704 1104 ntBASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTC1Q2NKJ3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 AC138932.1-201ENST00000534164 6830 ntBASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms