Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43bP86448 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43bP86448 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43bP86448 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43bP86448 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43bP86448 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trim43bP86448 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43bP86448 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43bP86448 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43bP86448 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43bP86448 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43bP86448 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43bP86448 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim43bP86448 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43bP86448 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim43bP86448 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim43bP86448 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43bP86448 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim43bP86448 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trim43bP86448 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trim43bP86448 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43bP86448 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim43bP86448 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.14□□□□□ -0.15
Trim43bP86448 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43bP86448 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43bP86448 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43bP86448 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim43bP86448 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43bP86448 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trim43bP86448 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43bP86448 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43bP86448 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43bP86448 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.14□□□□□ -0.15
Trim43bP86448 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43bP86448 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trim43bP86448 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim43bP86448 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Trim43bP86448 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.14□□□□□ -0.15
Trim43bP86448 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43bP86448 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43bP86448 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43bP86448 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43bP86448 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43bP86448 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43bP86448 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43bP86448 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trim43bP86448 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43bP86448 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43bP86448 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.13□□□□□ -0.15
Trim43bP86448 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43bP86448 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim43bP86448 Gm8410-201ENSMUST00000117225 605 ntBASIC14.13□□□□□ -0.15
Trim43bP86448 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Trim43bP86448 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.13□□□□□ -0.15
Trim43bP86448 Gm27622-201ENSMUST00000183779 60 ntBASIC14.13□□□□□ -0.15
Trim43bP86448 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.13□□□□□ -0.15
Trim43bP86448 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trim43bP86448 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43bP86448 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43bP86448 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43bP86448 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43bP86448 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43bP86448 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43bP86448 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43bP86448 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43bP86448 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43bP86448 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43bP86448 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43bP86448 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43bP86448 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trim43bP86448 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43bP86448 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43bP86448 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43bP86448 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43bP86448 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43bP86448 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43bP86448 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43bP86448 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43bP86448 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43bP86448 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43bP86448 Gm13453-201ENSMUST00000118708 357 ntBASIC14.12□□□□□ -0.15
Trim43bP86448 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43bP86448 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43bP86448 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim43bP86448 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43bP86448 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43bP86448 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43bP86448 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.12□□□□□ -0.15
Trim43bP86448 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43bP86448 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Trim43bP86448 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
Trim43bP86448 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43bP86448 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43bP86448 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43bP86448 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43bP86448 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43bP86448 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43bP86448 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43bP86448 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43bP86448 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms