Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
CLDN6P56747 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
CLDN6P56747 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CLDN6P56747 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN6P56747 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CLDN6P56747 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN6P56747 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN6P56747 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN6P56747 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDN6P56747 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDN6P56747 AC138969.3-201ENST00000546612 1459 ntBASIC15.99■□□□□ 0.15
CLDN6P56747 AC138932.2-201ENST00000548268 1459 ntBASIC15.99■□□□□ 0.15
CLDN6P56747 AC126755.4-201ENST00000549796 1459 ntBASIC15.99■□□□□ 0.15
CLDN6P56747 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDN6P56747 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN6P56747 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN6P56747 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN6P56747 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN6P56747 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN6P56747 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CLDN6P56747 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
CLDN6P56747 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
CLDN6P56747 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN6P56747 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CLDN6P56747 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.99■□□□□ 0.15
CLDN6P56747 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.99■□□□□ 0.15
CLDN6P56747 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.99■□□□□ 0.15
CLDN6P56747 AC009477.1-201ENST00000452936 217 ntBASIC15.99■□□□□ 0.15
CLDN6P56747 API5-211ENST00000534695 560 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDN6P56747 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDN6P56747 TP53TG3HP-202ENST00000569755 579 ntBASIC15.99■□□□□ 0.15
CLDN6P56747 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
CLDN6P56747 AC091167.2-201ENST00000579581 588 ntBASIC15.99■□□□□ 0.15
CLDN6P56747 AC007967.4-201ENST00000614700 386 ntBASIC15.99■□□□□ 0.15
CLDN6P56747 IGHV3-72-202ENST00000621503 303 ntBASIC15.99■□□□□ 0.15
CLDN6P56747 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDN6P56747 CU639417.3-201ENST00000624240 1404 ntBASIC15.99■□□□□ 0.15
CLDN6P56747 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN6P56747 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN6P56747 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CLDN6P56747 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN6P56747 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDN6P56747 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CLDN6P56747 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDN6P56747 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN6P56747 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CLDN6P56747 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDN6P56747 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDN6P56747 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN6P56747 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN6P56747 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN6P56747 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN6P56747 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN6P56747 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN6P56747 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN6P56747 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CLDN6P56747 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN6P56747 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN6P56747 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN6P56747 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN6P56747 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CLDN6P56747 DGCR5-201ENST00000399539 862 ntBASIC15.98■□□□□ 0.15
CLDN6P56747 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CLDN6P56747 SLC25A6P5-201ENST00000435663 894 ntBASIC15.98■□□□□ 0.15
CLDN6P56747 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.98■□□□□ 0.15
CLDN6P56747 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN6P56747 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.98■□□□□ 0.15
CLDN6P56747 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN6P56747 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.98■□□□□ 0.15
CLDN6P56747 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CLDN6P56747 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.98■□□□□ 0.15
CLDN6P56747 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.98■□□□□ 0.15
CLDN6P56747 MPDU1-223ENST00000582151 728 ntBASIC15.98■□□□□ 0.15
CLDN6P56747 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN6P56747 AL844908.2-201ENST00000609461 460 ntBASIC15.98■□□□□ 0.15
CLDN6P56747 TEX28P1-201ENST00000613479 1221 ntBASIC15.98■□□□□ 0.15
CLDN6P56747 TEX28P2-201ENST00000617764 1221 ntBASIC15.98■□□□□ 0.15
CLDN6P56747 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.98■□□□□ 0.15
CLDN6P56747 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN6P56747 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN6P56747 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN6P56747 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN6P56747 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
CLDN6P56747 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN6P56747 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CLDN6P56747 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
CLDN6P56747 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.97■□□□□ 0.15
CLDN6P56747 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN6P56747 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN6P56747 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CLDN6P56747 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
CLDN6P56747 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CLDN6P56747 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN6P56747 EGFEM1P-202ENST00000431685 1563 ntBASIC15.97■□□□□ 0.15
CLDN6P56747 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.97■□□□□ 0.15
CLDN6P56747 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN6P56747 AC134043.2-201ENST00000624206 2238 ntBASIC15.97■□□□□ 0.15
CLDN6P56747 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN6P56747 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN6P56747 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms