Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CXCL12P48061 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CXCL12P48061 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.48■□□□□ 0.23
CXCL12P48061 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CXCL12P48061 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CXCL12P48061 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.48■□□□□ 0.23
CXCL12P48061 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CXCL12P48061 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CXCL12P48061 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.48■□□□□ 0.23
CXCL12P48061 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.48■□□□□ 0.23
CXCL12P48061 AC007389.4-201ENST00000454674 793 ntBASIC16.48■□□□□ 0.23
CXCL12P48061 ELK1P1-201ENST00000485699 580 ntBASIC16.48■□□□□ 0.23
CXCL12P48061 AC023310.3-201ENST00000557027 670 ntBASIC16.48■□□□□ 0.23
CXCL12P48061 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CXCL12P48061 AC100756.1-201ENST00000562736 682 ntBASIC16.48■□□□□ 0.23
CXCL12P48061 AC138749.3-201ENST00000567691 622 ntBASIC16.48■□□□□ 0.23
CXCL12P48061 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.48■□□□□ 0.23
CXCL12P48061 MIR4259-201ENST00000584466 101 ntBASIC16.48■□□□□ 0.23
CXCL12P48061 CTBP2P3-201ENST00000585629 1255 ntBASIC16.48■□□□□ 0.23
CXCL12P48061 AL606495.2-201ENST00000605867 535 ntBASIC16.48■□□□□ 0.23
CXCL12P48061 AC116165.1-201ENST00000611806 668 ntBASIC16.48■□□□□ 0.23
CXCL12P48061 AC133552.6-201ENST00000613406 534 ntBASIC16.48■□□□□ 0.23
CXCL12P48061 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.48■□□□□ 0.23
CXCL12P48061 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.48■□□□□ 0.23
CXCL12P48061 COX11-210ENST00000639671 696 ntBASIC16.48■□□□□ 0.23
CXCL12P48061 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CXCL12P48061 AL671710.1-201ENST00000610245 2349 ntBASIC16.48■□□□□ 0.23
CXCL12P48061 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.48■□□□□ 0.23
CXCL12P48061 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
CXCL12P48061 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXCL12P48061 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CXCL12P48061 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.48■□□□□ 0.23
CXCL12P48061 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXCL12P48061 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.47■□□□□ 0.23
CXCL12P48061 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CXCL12P48061 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCL12P48061 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCL12P48061 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.47■□□□□ 0.23
CXCL12P48061 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.47■□□□□ 0.23
CXCL12P48061 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCL12P48061 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CXCL12P48061 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CXCL12P48061 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CXCL12P48061 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CXCL12P48061 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCL12P48061 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCL12P48061 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCL12P48061 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.47■□□□□ 0.23
CXCL12P48061 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
CXCL12P48061 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CXCL12P48061 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCL12P48061 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCL12P48061 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCL12P48061 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.47■□□□□ 0.23
CXCL12P48061 KRT223P-202ENST00000449164 1292 ntBASIC16.47■□□□□ 0.23
CXCL12P48061 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CXCL12P48061 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.47■□□□□ 0.23
CXCL12P48061 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCL12P48061 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.47■□□□□ 0.23
CXCL12P48061 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.47■□□□□ 0.23
CXCL12P48061 MIR6069-201ENST00000620069 79 ntBASIC16.47■□□□□ 0.23
CXCL12P48061 AL033527.4-201ENST00000641026 673 ntBASIC16.47■□□□□ 0.23
CXCL12P48061 AC006277.1-201ENST00000624348 1610 ntBASIC16.47■□□□□ 0.23
CXCL12P48061 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CXCL12P48061 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.47■□□□□ 0.23
CXCL12P48061 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCL12P48061 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCL12P48061 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.46■□□□□ 0.23
CXCL12P48061 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.46■□□□□ 0.23
CXCL12P48061 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CXCL12P48061 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.46■□□□□ 0.23
CXCL12P48061 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCL12P48061 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCL12P48061 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCL12P48061 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCL12P48061 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.46■□□□□ 0.23
CXCL12P48061 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.46■□□□□ 0.23
CXCL12P48061 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCL12P48061 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCL12P48061 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCL12P48061 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCL12P48061 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCL12P48061 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCL12P48061 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCL12P48061 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.46■□□□□ 0.23
CXCL12P48061 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCL12P48061 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCL12P48061 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.46■□□□□ 0.23
CXCL12P48061 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.46■□□□□ 0.23
CXCL12P48061 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.46■□□□□ 0.23
CXCL12P48061 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CXCL12P48061 AC013467.2-201ENST00000605472 835 ntBASIC16.46■□□□□ 0.23
CXCL12P48061 AC093726.1-201ENST00000608064 963 ntBASIC16.46■□□□□ 0.23
CXCL12P48061 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.46■□□□□ 0.23
CXCL12P48061 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CXCL12P48061 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCL12P48061 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCL12P48061 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCL12P48061 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
CXCL12P48061 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms