Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.17□□□□□ -0.14
VAMP1P23763 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 TSPY14P-201ENST00000303979 915 ntBASIC14.17□□□□□ -0.14
VAMP1P23763 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.17□□□□□ -0.14
VAMP1P23763 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
VAMP1P23763 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.17□□□□□ -0.14
VAMP1P23763 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 MIR1238-201ENST00000408483 83 ntBASIC14.17□□□□□ -0.14
VAMP1P23763 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.17□□□□□ -0.14
VAMP1P23763 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC14.17□□□□□ -0.14
VAMP1P23763 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.17□□□□□ -0.14
VAMP1P23763 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.17□□□□□ -0.14
VAMP1P23763 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.17□□□□□ -0.14
VAMP1P23763 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.17□□□□□ -0.14
VAMP1P23763 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.17□□□□□ -0.14
VAMP1P23763 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.17□□□□□ -0.14
VAMP1P23763 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.17□□□□□ -0.14
VAMP1P23763 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
VAMP1P23763 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.17□□□□□ -0.14
VAMP1P23763 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 AC010491.1-201ENST00000563101 2797 ntBASIC14.17□□□□□ -0.14
VAMP1P23763 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.16□□□□□ -0.14
VAMP1P23763 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
VAMP1P23763 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 AL596087.1-201ENST00000400979 1969 ntBASIC14.16□□□□□ -0.14
VAMP1P23763 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
VAMP1P23763 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.16□□□□□ -0.14
VAMP1P23763 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.16□□□□□ -0.14
VAMP1P23763 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.16□□□□□ -0.14
VAMP1P23763 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
VAMP1P23763 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.16□□□□□ -0.14
VAMP1P23763 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.16□□□□□ -0.14
VAMP1P23763 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
VAMP1P23763 ECEL1P2-202ENST00000465689 757 ntBASIC14.16□□□□□ -0.14
VAMP1P23763 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.16□□□□□ -0.14
VAMP1P23763 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.16□□□□□ -0.14
VAMP1P23763 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.16□□□□□ -0.14
VAMP1P23763 EGLN1P1-201ENST00000531623 762 ntBASIC14.16□□□□□ -0.14
VAMP1P23763 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.16□□□□□ -0.14
VAMP1P23763 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.16□□□□□ -0.14
VAMP1P23763 AC111152.3-201ENST00000569699 673 ntBASIC14.16□□□□□ -0.14
VAMP1P23763 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 AL136038.4-201ENST00000603606 1261 ntBASIC14.16□□□□□ -0.14
VAMP1P23763 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.16□□□□□ -0.14
VAMP1P23763 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.16□□□□□ -0.14
VAMP1P23763 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
VAMP1P23763 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
VAMP1P23763 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.16□□□□□ -0.14
VAMP1P23763 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
VAMP1P23763 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.16□□□□□ -0.14
VAMP1P23763 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms