Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 AC103564.2-201ENST00000432853 1299 ntBASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 AC122714.2-201ENST00000502787 707 ntBASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 VENTXP5-201ENST00000523979 775 ntBASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 RNF126P1-202ENST00000569893 925 ntBASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 AC073347.1-201ENST00000421633 2643 ntBASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.4□□□□□ -0.1
MEIS3P1A6NDR6 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
MEIS3P1A6NDR6 AC126177.1-201ENST00000547829 2218 ntBASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 COX11P1-201ENST00000489116 835 ntBASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 AC125634.1-201ENST00000438758 1403 ntBASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
MEIS3P1A6NDR6 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 AL603832.2-201ENST00000566195 2125 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms