Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ube3bQ9ES34 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3bQ9ES34 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC16.29■□□□□ 0.2
Ube3bQ9ES34 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3bQ9ES34 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ube3bQ9ES34 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC16.28■□□□□ 0.2
Ube3bQ9ES34 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3bQ9ES34 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Ube3bQ9ES34 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3bQ9ES34 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3bQ9ES34 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Ube3bQ9ES34 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3bQ9ES34 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3bQ9ES34 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.28■□□□□ 0.2
Ube3bQ9ES34 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.28■□□□□ 0.2
Ube3bQ9ES34 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3bQ9ES34 Gm17150-201ENSMUST00000165577 381 ntBASIC16.28■□□□□ 0.2
Ube3bQ9ES34 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ube3bQ9ES34 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3bQ9ES34 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ube3bQ9ES34 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3bQ9ES34 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3bQ9ES34 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3bQ9ES34 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Ube3bQ9ES34 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3bQ9ES34 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3bQ9ES34 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3bQ9ES34 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3bQ9ES34 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3bQ9ES34 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.27■□□□□ 0.2
Ube3bQ9ES34 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3bQ9ES34 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3bQ9ES34 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3bQ9ES34 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3bQ9ES34 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.27■□□□□ 0.2
Ube3bQ9ES34 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ube3bQ9ES34 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3bQ9ES34 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ube3bQ9ES34 Gm5687-201ENSMUST00000118252 640 ntBASIC16.27■□□□□ 0.2
Ube3bQ9ES34 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC16.27■□□□□ 0.2
Ube3bQ9ES34 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC16.27■□□□□ 0.2
Ube3bQ9ES34 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC16.27■□□□□ 0.2
Ube3bQ9ES34 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.27■□□□□ 0.2
Ube3bQ9ES34 Gm18473-201ENSMUST00000220543 868 ntBASIC16.27■□□□□ 0.2
Ube3bQ9ES34 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.27■□□□□ 0.2
Ube3bQ9ES34 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3bQ9ES34 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3bQ9ES34 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3bQ9ES34 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3bQ9ES34 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3bQ9ES34 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3bQ9ES34 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube3bQ9ES34 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube3bQ9ES34 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube3bQ9ES34 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube3bQ9ES34 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube3bQ9ES34 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube3bQ9ES34 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.27■□□□□ 0.19
Ube3bQ9ES34 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube3bQ9ES34 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Ube3bQ9ES34 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube3bQ9ES34 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms