Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 KRT8P13-201ENST00000463294 1010 ntBASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 AC002558.1-201ENST00000488906 803 ntBASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 WFDC1-204ENST00000613603 549 ntBASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 AC138028.4-201ENST00000564984 1845 ntBASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 ACTG1P17-201ENST00000558391 1119 ntBASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 AL031055.1-201ENST00000606362 631 ntBASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CSMD1Q96PZ7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 LDHBP1-201ENST00000455730 1119 ntBASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 FAM86HP-204ENST00000513466 959 ntBASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 RNU1-129P-201ENST00000384064 167 ntBASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 HINT2P1-201ENST00000419438 481 ntBASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 AC123567.1-201ENST00000548294 1261 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms