Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 TUBB7P-202ENST00000428444 1305 ntBASIC16.74■□□□□ 0.27
SIPA1Q96FS4 TUBB8P7-204ENST00000567960 1332 ntBASIC16.74■□□□□ 0.27
SIPA1Q96FS4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 AC097493.3-201ENST00000509725 367 ntBASIC16.74■□□□□ 0.27
SIPA1Q96FS4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 AC124947.2-201ENST00000547118 1133 ntBASIC16.74■□□□□ 0.27
SIPA1Q96FS4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 TERF1P3-201ENST00000505638 1227 ntBASIC16.73■□□□□ 0.27
SIPA1Q96FS4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 AC190387.1-201ENST00000551683 408 ntBASIC16.73■□□□□ 0.27
SIPA1Q96FS4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SIPA1Q96FS4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 AC236430.1-201ENST00000402231 743 ntBASIC16.72■□□□□ 0.27
SIPA1Q96FS4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 AC142381.1-201ENST00000426099 345 ntBASIC16.72■□□□□ 0.27
SIPA1Q96FS4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 AC002472.2-201ENST00000442739 958 ntBASIC16.72■□□□□ 0.27
SIPA1Q96FS4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SIPA1Q96FS4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms