Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.65■□□□□ 0.74
TOP1P11387 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
TOP1P11387 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TOP1P11387 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TOP1P11387 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.65■□□□□ 0.74
TOP1P11387 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.65■□□□□ 0.74
TOP1P11387 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TOP1P11387 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TOP1P11387 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.64■□□□□ 0.74
TOP1P11387 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TOP1P11387 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TOP1P11387 AL118508.1-201ENST00000613502 2345 ntBASIC19.64■□□□□ 0.74
TOP1P11387 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TOP1P11387 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.64■□□□□ 0.73
TOP1P11387 AC254562.1-201ENST00000417586 456 ntBASIC19.64■□□□□ 0.73
TOP1P11387 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.64■□□□□ 0.73
TOP1P11387 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TOP1P11387 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.64■□□□□ 0.73
TOP1P11387 AC109635.5-201ENST00000533593 962 ntBASIC19.64■□□□□ 0.73
TOP1P11387 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.64■□□□□ 0.73
TOP1P11387 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TOP1P11387 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.64■□□□□ 0.73
TOP1P11387 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.64■□□□□ 0.73
TOP1P11387 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TOP1P11387 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TOP1P11387 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TOP1P11387 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TOP1P11387 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TOP1P11387 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.64■□□□□ 0.73
TOP1P11387 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TOP1P11387 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TOP1P11387 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TOP1P11387 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
TOP1P11387 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.64■□□□□ 0.73
TOP1P11387 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TOP1P11387 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.64■□□□□ 0.73
TOP1P11387 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TOP1P11387 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.63■□□□□ 0.73
TOP1P11387 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.63■□□□□ 0.73
TOP1P11387 PCDHB17P-201ENST00000539533 2393 ntBASIC19.63■□□□□ 0.73
TOP1P11387 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TOP1P11387 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.63■□□□□ 0.73
TOP1P11387 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TOP1P11387 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TOP1P11387 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.63■□□□□ 0.73
TOP1P11387 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TOP1P11387 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
TOP1P11387 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TOP1P11387 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.63■□□□□ 0.73
TOP1P11387 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TOP1P11387 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.63■□□□□ 0.73
TOP1P11387 ADH5P3-201ENST00000433842 1137 ntBASIC19.63■□□□□ 0.73
TOP1P11387 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.63■□□□□ 0.73
TOP1P11387 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.63■□□□□ 0.73
TOP1P11387 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.63■□□□□ 0.73
TOP1P11387 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
TOP1P11387 MIR3909-201ENST00000579518 119 ntBASIC19.63■□□□□ 0.73
TOP1P11387 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TOP1P11387 AC013467.2-201ENST00000605472 835 ntBASIC19.63■□□□□ 0.73
TOP1P11387 AL031055.1-201ENST00000606362 631 ntBASIC19.63■□□□□ 0.73
TOP1P11387 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TOP1P11387 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TOP1P11387 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.63■□□□□ 0.73
TOP1P11387 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
TOP1P11387 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TOP1P11387 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TOP1P11387 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.63■□□□□ 0.73
TOP1P11387 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TOP1P11387 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TOP1P11387 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TOP1P11387 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TOP1P11387 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TOP1P11387 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TOP1P11387 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TOP1P11387 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TOP1P11387 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TOP1P11387 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TOP1P11387 AC006277.1-201ENST00000624348 1610 ntBASIC19.62■□□□□ 0.73
TOP1P11387 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TOP1P11387 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TOP1P11387 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TOP1P11387 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TOP1P11387 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TOP1P11387 PMS2P4-201ENST00000412466 1052 ntBASIC19.62■□□□□ 0.73
TOP1P11387 AL355306.1-201ENST00000415580 579 ntBASIC19.62■□□□□ 0.73
TOP1P11387 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TOP1P11387 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.62■□□□□ 0.73
TOP1P11387 AC092474.2-201ENST00000424288 719 ntBASIC19.62■□□□□ 0.73
TOP1P11387 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.62■□□□□ 0.73
TOP1P11387 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TOP1P11387 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.62■□□□□ 0.73
TOP1P11387 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.62■□□□□ 0.73
TOP1P11387 AL596442.2-201ENST00000610240 980 ntBASIC19.62■□□□□ 0.73
TOP1P11387 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.62■□□□□ 0.73
TOP1P11387 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TOP1P11387 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TOP1P11387 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TOP1P11387 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.62■□□□□ 0.73
TOP1P11387 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TOP1P11387 LINC00895-201ENST00000629028 1637 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms