Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN3O95197 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN3O95197 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN3O95197 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RTN3O95197 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN3O95197 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN3O95197 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.65■□□□□ 0.42
RTN3O95197 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN3O95197 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.65■□□□□ 0.42
RTN3O95197 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RTN3O95197 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN3O95197 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN3O95197 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN3O95197 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN3O95197 PMS2P4-201ENST00000412466 1052 ntBASIC17.65■□□□□ 0.42
RTN3O95197 CNN2P11-201ENST00000429351 262 ntBASIC17.65■□□□□ 0.42
RTN3O95197 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.65■□□□□ 0.42
RTN3O95197 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.65■□□□□ 0.42
RTN3O95197 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.65■□□□□ 0.42
RTN3O95197 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.65■□□□□ 0.42
RTN3O95197 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.65■□□□□ 0.42
RTN3O95197 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN3O95197 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RTN3O95197 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RTN3O95197 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.65■□□□□ 0.42
RTN3O95197 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.65■□□□□ 0.42
RTN3O95197 AC099522.2-201ENST00000607001 744 ntBASIC17.65■□□□□ 0.42
RTN3O95197 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.65■□□□□ 0.42
RTN3O95197 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN3O95197 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RTN3O95197 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RTN3O95197 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.65■□□□□ 0.42
RTN3O95197 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RTN3O95197 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.65■□□□□ 0.42
RTN3O95197 NKILA-202ENST00000614771 2598 ntBASIC17.65■□□□□ 0.42
RTN3O95197 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN3O95197 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN3O95197 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN3O95197 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RTN3O95197 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
RTN3O95197 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RTN3O95197 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RTN3O95197 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RTN3O95197 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTN3O95197 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RTN3O95197 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN3O95197 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTN3O95197 AC011676.5-201ENST00000624864 2660 ntBASIC17.64■□□□□ 0.41
RTN3O95197 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTN3O95197 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN3O95197 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN3O95197 RNU1-129P-201ENST00000384064 167 ntBASIC17.64■□□□□ 0.41
RTN3O95197 AL355306.1-201ENST00000415580 579 ntBASIC17.64■□□□□ 0.41
RTN3O95197 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.64■□□□□ 0.41
RTN3O95197 AL671277.1-201ENST00000429656 993 ntBASIC17.64■□□□□ 0.41
RTN3O95197 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN3O95197 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN3O95197 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN3O95197 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.64■□□□□ 0.41
RTN3O95197 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.64■□□□□ 0.41
RTN3O95197 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
RTN3O95197 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
RTN3O95197 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN3O95197 U1.21-201ENST00000580816 167 ntBASIC17.64■□□□□ 0.41
RTN3O95197 CYP2A7P1-201ENST00000595391 815 ntBASIC17.64■□□□□ 0.41
RTN3O95197 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RTN3O95197 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTN3O95197 AL031055.1-201ENST00000606362 631 ntBASIC17.64■□□□□ 0.41
RTN3O95197 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.64■□□□□ 0.41
RTN3O95197 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
RTN3O95197 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTN3O95197 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN3O95197 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN3O95197 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN3O95197 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN3O95197 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
RTN3O95197 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN3O95197 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN3O95197 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTN3O95197 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN3O95197 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN3O95197 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.63■□□□□ 0.41
RTN3O95197 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTN3O95197 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN3O95197 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN3O95197 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN3O95197 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.63■□□□□ 0.41
RTN3O95197 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
RTN3O95197 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.63■□□□□ 0.41
RTN3O95197 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTN3O95197 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
RTN3O95197 ADH5P3-201ENST00000433842 1137 ntBASIC17.63■□□□□ 0.41
RTN3O95197 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.63■□□□□ 0.41
RTN3O95197 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
RTN3O95197 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.63■□□□□ 0.41
RTN3O95197 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.63■□□□□ 0.41
RTN3O95197 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.63■□□□□ 0.41
RTN3O95197 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
RTN3O95197 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.63■□□□□ 0.41
RTN3O95197 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms