Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
ZIC3O60481 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
ZIC3O60481 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZIC3O60481 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
ZIC3O60481 LTB4R2-202ENST00000528054 3092 ntBASIC15.03■□□□□ -0
ZIC3O60481 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZIC3O60481 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ZIC3O60481 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZIC3O60481 CNN2P11-201ENST00000429351 262 ntBASIC15.03■□□□□ -0
ZIC3O60481 AP000344.2-201ENST00000512987 629 ntBASIC15.03■□□□□ -0
ZIC3O60481 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
ZIC3O60481 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.03■□□□□ -0
ZIC3O60481 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.03■□□□□ -0
ZIC3O60481 LINC01225-203ENST00000563550 1244 ntBASIC15.03■□□□□ -0
ZIC3O60481 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.03■□□□□ -0
ZIC3O60481 SNHG9-202ENST00000564014 471 ntBASIC15.03■□□□□ -0
ZIC3O60481 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.03■□□□□ -0
ZIC3O60481 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
ZIC3O60481 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
ZIC3O60481 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
ZIC3O60481 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
ZIC3O60481 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.03■□□□□ -0
ZIC3O60481 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.03■□□□□ -0
ZIC3O60481 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZIC3O60481 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZIC3O60481 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
ZIC3O60481 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZIC3O60481 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZIC3O60481 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
ZIC3O60481 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZIC3O60481 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.03■□□□□ -0
ZIC3O60481 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ZIC3O60481 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZIC3O60481 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZIC3O60481 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ZIC3O60481 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.02■□□□□ -0
ZIC3O60481 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ZIC3O60481 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.02■□□□□ -0
ZIC3O60481 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.02■□□□□ -0
ZIC3O60481 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.02■□□□□ -0
ZIC3O60481 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ZIC3O60481 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ZIC3O60481 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.02■□□□□ -0
ZIC3O60481 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
ZIC3O60481 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
ZIC3O60481 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
ZIC3O60481 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
ZIC3O60481 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.02■□□□□ -0
ZIC3O60481 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
ZIC3O60481 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.02■□□□□ -0
ZIC3O60481 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ZIC3O60481 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.02■□□□□ -0
ZIC3O60481 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
ZIC3O60481 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.02■□□□□ -0
ZIC3O60481 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ZIC3O60481 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.02■□□□□ -0
ZIC3O60481 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
ZIC3O60481 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.02■□□□□ -0
ZIC3O60481 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.02■□□□□ -0
ZIC3O60481 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.02■□□□□ -0
ZIC3O60481 RN7SL589P-201ENST00000481268 310 ntBASIC15.02■□□□□ -0
ZIC3O60481 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.02■□□□□ -0
ZIC3O60481 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.02■□□□□ -0
ZIC3O60481 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.02□□□□□ -0.01
ZIC3O60481 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ZIC3O60481 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ZIC3O60481 AGGF1P2-201ENST00000426656 2106 ntBASIC15.02□□□□□ -0.01
ZIC3O60481 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ZIC3O60481 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
ZIC3O60481 AL031731.1-201ENST00000642131 2094 ntBASIC15.02□□□□□ -0.01
ZIC3O60481 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
ZIC3O60481 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
ZIC3O60481 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
ZIC3O60481 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
ZIC3O60481 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ZIC3O60481 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
ZIC3O60481 HLA-A-202ENST00000376806 1854 ntBASIC15.01□□□□□ -0.01
ZIC3O60481 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ZIC3O60481 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ZIC3O60481 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ZIC3O60481 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ZIC3O60481 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ZIC3O60481 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ZIC3O60481 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
ZIC3O60481 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ZIC3O60481 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ZIC3O60481 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.01□□□□□ -0.01
ZIC3O60481 FLJ38576-201ENST00000623820 2459 ntBASIC15.01□□□□□ -0.01
ZIC3O60481 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.01□□□□□ -0.01
ZIC3O60481 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
ZIC3O60481 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ZIC3O60481 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.01□□□□□ -0.01
ZIC3O60481 AL592309.1-201ENST00000443127 649 ntBASIC15.01□□□□□ -0.01
ZIC3O60481 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.01□□□□□ -0.01
ZIC3O60481 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.01□□□□□ -0.01
ZIC3O60481 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.01□□□□□ -0.01
ZIC3O60481 KRT18P34-201ENST00000488218 1270 ntBASIC15.01□□□□□ -0.01
ZIC3O60481 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.01□□□□□ -0.01
ZIC3O60481 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
ZIC3O60481 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms