Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 PCDHA1-201ENST00000378133 2726 ntBASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 PMS2P4-201ENST00000412466 1052 ntBASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 POLD2P1-201ENST00000511220 997 ntBASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 KRT19P2-202ENST00000557173 1012 ntBASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 PDPK2P-202ENST00000562415 1191 ntBASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.15□□□□□ -0.46
SMIM9A6NGZ8 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
SMIM9A6NGZ8 AC006277.1-201ENST00000624348 1610 ntBASIC12.15□□□□□ -0.47
SMIM9A6NGZ8 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
SMIM9A6NGZ8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
SMIM9A6NGZ8 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC12.15□□□□□ -0.47
SMIM9A6NGZ8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
SMIM9A6NGZ8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SMIM9A6NGZ8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SMIM9A6NGZ8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 AC025580.3-201ENST00000617932 1424 ntBASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 AL122018.1-201ENST00000446607 2310 ntBASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 MCCD1P2-201ENST00000423228 335 ntBASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 KRT18P2-201ENST00000447938 1258 ntBASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 MIR4492-201ENST00000581627 80 ntBASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM9A6NGZ8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms