Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PALM3A6NDB9 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PALM3A6NDB9 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PALM3A6NDB9 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PALM3A6NDB9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PALM3A6NDB9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PALM3A6NDB9 AC020916.1-201ENST00000587762 1774 ntBASIC19.27■□□□□ 0.68
PALM3A6NDB9 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.27■□□□□ 0.68
PALM3A6NDB9 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PALM3A6NDB9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PALM3A6NDB9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PALM3A6NDB9 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PALM3A6NDB9 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.27■□□□□ 0.68
PALM3A6NDB9 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PALM3A6NDB9 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PALM3A6NDB9 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.27■□□□□ 0.68
PALM3A6NDB9 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.27■□□□□ 0.68
PALM3A6NDB9 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.27■□□□□ 0.68
PALM3A6NDB9 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.27■□□□□ 0.68
PALM3A6NDB9 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.27■□□□□ 0.68
PALM3A6NDB9 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.27■□□□□ 0.68
PALM3A6NDB9 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.27■□□□□ 0.68
PALM3A6NDB9 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.27■□□□□ 0.68
PALM3A6NDB9 SNHG9-202ENST00000564014 471 ntBASIC19.27■□□□□ 0.68
PALM3A6NDB9 AL138918.1-201ENST00000568306 659 ntBASIC19.27■□□□□ 0.68
PALM3A6NDB9 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.27■□□□□ 0.68
PALM3A6NDB9 AC027612.4-201ENST00000605371 583 ntBASIC19.27■□□□□ 0.68
PALM3A6NDB9 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.27■□□□□ 0.68
PALM3A6NDB9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.27■□□□□ 0.68
PALM3A6NDB9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PALM3A6NDB9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PALM3A6NDB9 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PALM3A6NDB9 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PALM3A6NDB9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PALM3A6NDB9 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
PALM3A6NDB9 PCDHA12-202ENST00000613593 2588 ntBASIC19.27■□□□□ 0.67
PALM3A6NDB9 GPAA1P2-202ENST00000606848 1787 ntBASIC19.27■□□□□ 0.67
PALM3A6NDB9 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.26■□□□□ 0.67
PALM3A6NDB9 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
PALM3A6NDB9 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
PALM3A6NDB9 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.26■□□□□ 0.67
PALM3A6NDB9 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PALM3A6NDB9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PALM3A6NDB9 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PALM3A6NDB9 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PALM3A6NDB9 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PALM3A6NDB9 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.26■□□□□ 0.67
PALM3A6NDB9 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PALM3A6NDB9 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PALM3A6NDB9 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.26■□□□□ 0.67
PALM3A6NDB9 KRT18P34-201ENST00000488218 1270 ntBASIC19.26■□□□□ 0.67
PALM3A6NDB9 AC069335.1-201ENST00000489972 472 ntBASIC19.26■□□□□ 0.67
PALM3A6NDB9 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.26■□□□□ 0.67
PALM3A6NDB9 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.26■□□□□ 0.67
PALM3A6NDB9 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.26■□□□□ 0.67
PALM3A6NDB9 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.26■□□□□ 0.67
PALM3A6NDB9 AC004835.2-201ENST00000603762 682 ntBASIC19.26■□□□□ 0.67
PALM3A6NDB9 AC084121.4-201ENST00000641598 221 ntBASIC19.26■□□□□ 0.67
PALM3A6NDB9 AF228730.8-201ENST00000642140 221 ntBASIC19.26■□□□□ 0.67
PALM3A6NDB9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PALM3A6NDB9 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PALM3A6NDB9 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PALM3A6NDB9 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PALM3A6NDB9 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PALM3A6NDB9 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.26■□□□□ 0.67
PALM3A6NDB9 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PALM3A6NDB9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.26■□□□□ 0.67
PALM3A6NDB9 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PALM3A6NDB9 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.26■□□□□ 0.67
PALM3A6NDB9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PALM3A6NDB9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PALM3A6NDB9 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PALM3A6NDB9 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PALM3A6NDB9 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PALM3A6NDB9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
PALM3A6NDB9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PALM3A6NDB9 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.25■□□□□ 0.67
PALM3A6NDB9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PALM3A6NDB9 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.25■□□□□ 0.67
PALM3A6NDB9 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PALM3A6NDB9 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PALM3A6NDB9 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PALM3A6NDB9 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PALM3A6NDB9 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.25■□□□□ 0.67
PALM3A6NDB9 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.25■□□□□ 0.67
PALM3A6NDB9 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
PALM3A6NDB9 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.25■□□□□ 0.67
PALM3A6NDB9 AL592309.1-201ENST00000443127 649 ntBASIC19.25■□□□□ 0.67
PALM3A6NDB9 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.25■□□□□ 0.67
PALM3A6NDB9 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.25■□□□□ 0.67
PALM3A6NDB9 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.25■□□□□ 0.67
PALM3A6NDB9 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PALM3A6NDB9 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
PALM3A6NDB9 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
PALM3A6NDB9 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.25■□□□□ 0.67
PALM3A6NDB9 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PALM3A6NDB9 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PALM3A6NDB9 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.25■□□□□ 0.67
PALM3A6NDB9 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.25■□□□□ 0.67
PALM3A6NDB9 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms