Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 AC087499.6-201ENST00000411576 835 ntBASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 AC004790.1-201ENST00000612686 536 ntBASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 AL391825.1-201ENST00000457671 1364 ntBASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 RN7SL752P-201ENST00000463779 287 ntBASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 RN7SL618P-201ENST00000477850 296 ntBASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HCFC2Q9Y5Z7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 SPDYE19P-201ENST00000338590 713 ntBASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 AL512384.1-201ENST00000406683 331 ntBASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 AL512361.1-201ENST00000554200 418 ntBASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 WASH4P-201ENST00000564273 1246 ntBASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 AC132938.2-201ENST00000579188 680 ntBASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 AL591163.1-201ENST00000641757 987 ntBASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 AC006277.1-201ENST00000624348 1610 ntBASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.35■□□□□ 0.37
HCFC2Q9Y5Z7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 HTR7P1-202ENST00000624664 4411 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms