Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB11Q9Y5F2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 FAM8A3P-201ENST00000427218 844 ntBASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 FAM58CP-201ENST00000435741 640 ntBASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 AP000344.2-201ENST00000512987 629 ntBASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 AC005915.1-201ENST00000624912 2018 ntBASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB11Q9Y5F2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 IGLL3P-201ENST00000412472 434 ntBASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 SLC25A6P2-201ENST00000497974 877 ntBASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 KRT19P2-202ENST00000557173 1012 ntBASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 AC004449.1-201ENST00000564240 433 ntBASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 TUBB8P12-201ENST00000308911 1335 ntBASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 TUBB7P-202ENST00000428444 1305 ntBASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 TUBB8P7-204ENST00000567960 1332 ntBASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 AC129492.6-201ENST00000611383 1305 ntBASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB11Q9Y5F2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB11Q9Y5F2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms