Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 MIR4515-201ENST00000584082 81 ntBASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 AL645728.2-201ENST00000641974 660 ntBASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 FRMD8P1-201ENST00000440433 1524 ntBASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 AC046158.3-201ENST00000624947 2558 ntBASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 AGGF1P2-201ENST00000426656 2106 ntBASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 AC254562.1-201ENST00000417586 456 ntBASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 AC105020.1-201ENST00000435356 2205 ntBASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 PCDHA14-201ENST00000506751 2298 ntBASIC19.85■□□□□ 0.77
CLIP2Q9UDT6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 PCDH8P1-201ENST00000428983 2773 ntBASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 ACTG1P14-201ENST00000446382 1122 ntBASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLIP2Q9UDT6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms