Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.35■□□□□ 0.85
HMG20BQ9P0W2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HMG20BQ9P0W2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.35■□□□□ 0.85
HMG20BQ9P0W2 AP002490.2-201ENST00000524791 560 ntBASIC20.35■□□□□ 0.85
HMG20BQ9P0W2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.35■□□□□ 0.85
HMG20BQ9P0W2 AC027796.2-201ENST00000575326 344 ntBASIC20.35■□□□□ 0.85
HMG20BQ9P0W2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.35■□□□□ 0.85
HMG20BQ9P0W2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.35■□□□□ 0.85
HMG20BQ9P0W2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
HMG20BQ9P0W2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HMG20BQ9P0W2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMG20BQ9P0W2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.35■□□□□ 0.85
HMG20BQ9P0W2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.35■□□□□ 0.85
HMG20BQ9P0W2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMG20BQ9P0W2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HMG20BQ9P0W2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.35■□□□□ 0.85
HMG20BQ9P0W2 LINC00895-201ENST00000629028 1637 ntBASIC20.35■□□□□ 0.85
HMG20BQ9P0W2 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
HMG20BQ9P0W2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 SPCS2P4-201ENST00000436160 681 ntBASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 AC013467.2-201ENST00000605472 835 ntBASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 SNX33P1-201ENST00000592116 1762 ntBASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMG20BQ9P0W2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
HMG20BQ9P0W2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
HMG20BQ9P0W2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HMG20BQ9P0W2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HMG20BQ9P0W2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HMG20BQ9P0W2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HMG20BQ9P0W2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.33■□□□□ 0.85
HMG20BQ9P0W2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HMG20BQ9P0W2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HMG20BQ9P0W2 AL627223.1-201ENST00000416693 442 ntBASIC20.33■□□□□ 0.85
HMG20BQ9P0W2 TSEN15P1-201ENST00000423257 515 ntBASIC20.33■□□□□ 0.85
HMG20BQ9P0W2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.33■□□□□ 0.85
HMG20BQ9P0W2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.33■□□□□ 0.85
HMG20BQ9P0W2 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.33■□□□□ 0.85
HMG20BQ9P0W2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.33■□□□□ 0.85
HMG20BQ9P0W2 LINC01225-203ENST00000563550 1244 ntBASIC20.33■□□□□ 0.85
HMG20BQ9P0W2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.33■□□□□ 0.85
HMG20BQ9P0W2 AC078925.2-201ENST00000624013 1973 ntBASIC20.33■□□□□ 0.84
HMG20BQ9P0W2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.33■□□□□ 0.84
HMG20BQ9P0W2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HMG20BQ9P0W2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HMG20BQ9P0W2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.33■□□□□ 0.84
HMG20BQ9P0W2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
HMG20BQ9P0W2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
HMG20BQ9P0W2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
HMG20BQ9P0W2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HMG20BQ9P0W2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HMG20BQ9P0W2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 AL592309.1-201ENST00000443127 649 ntBASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 RN7SL589P-201ENST00000481268 310 ntBASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 AC069335.1-201ENST00000489972 472 ntBASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 WASH6P-202ENST00000359512 1437 ntBASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms