Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 POR-209ENST00000439269 1858 ntTSL 2 BASIC25.16■■□□□ 1.62
SCAF1Q9H7N4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
SCAF1Q9H7N4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SCAF1Q9H7N4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SCAF1Q9H7N4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SCAF1Q9H7N4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SCAF1Q9H7N4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC25.16■■□□□ 1.62
SCAF1Q9H7N4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
SCAF1Q9H7N4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 FAM58CP-201ENST00000435741 640 ntBASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 NMU-203ENST00000507338 658 ntTSL 3 BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 AC125634.1-201ENST00000438758 1403 ntBASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
SCAF1Q9H7N4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SCAF1Q9H7N4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
SCAF1Q9H7N4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SCAF1Q9H7N4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC25.14■■□□□ 1.62
SCAF1Q9H7N4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SCAF1Q9H7N4 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
SCAF1Q9H7N4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SCAF1Q9H7N4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC25.14■■□□□ 1.62
SCAF1Q9H7N4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC25.14■■□□□ 1.62
SCAF1Q9H7N4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SCAF1Q9H7N4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC25.14■■□□□ 1.62
SCAF1Q9H7N4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC25.14■■□□□ 1.62
SCAF1Q9H7N4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC25.14■■□□□ 1.61
SCAF1Q9H7N4 NFYC-AS1-201ENST00000606277 1687 ntBASIC25.14■■□□□ 1.61
SCAF1Q9H7N4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
SCAF1Q9H7N4 AC006116.8-202ENST00000587620 1550 ntBASIC25.14■■□□□ 1.61
SCAF1Q9H7N4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
SCAF1Q9H7N4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
SCAF1Q9H7N4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.61
SCAF1Q9H7N4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC25.14■■□□□ 1.61
SCAF1Q9H7N4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
SCAF1Q9H7N4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
SCAF1Q9H7N4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 DUX4L27-201ENST00000554796 1261 ntBASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 HMGB1P8-201ENST00000558211 949 ntBASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SCAF1Q9H7N4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 STOM-202ENST00000347359 870 ntTSL 2 BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 LINC00628-201ENST00000628516 1289 ntBASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms