Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM4Q9C037 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM4Q9C037 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM4Q9C037 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM4Q9C037 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.87■□□□□ 0.29
TRIM4Q9C037 AL592071.1-201ENST00000611956 408 ntBASIC16.87■□□□□ 0.29
TRIM4Q9C037 AC124864.1-201ENST00000623408 392 ntBASIC16.87■□□□□ 0.29
TRIM4Q9C037 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM4Q9C037 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM4Q9C037 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM4Q9C037 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM4Q9C037 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM4Q9C037 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
TRIM4Q9C037 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM4Q9C037 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM4Q9C037 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
TRIM4Q9C037 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM4Q9C037 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM4Q9C037 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM4Q9C037 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM4Q9C037 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRIM4Q9C037 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM4Q9C037 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM4Q9C037 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM4Q9C037 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM4Q9C037 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM4Q9C037 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM4Q9C037 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM4Q9C037 AC099063.4-201ENST00000641099 1602 ntBASIC16.86■□□□□ 0.29
TRIM4Q9C037 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM4Q9C037 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM4Q9C037 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM4Q9C037 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM4Q9C037 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM4Q9C037 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
TRIM4Q9C037 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.86■□□□□ 0.29
TRIM4Q9C037 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM4Q9C037 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.86■□□□□ 0.29
TRIM4Q9C037 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.86■□□□□ 0.29
TRIM4Q9C037 MIR3197-201ENST00000582241 73 ntBASIC16.86■□□□□ 0.29
TRIM4Q9C037 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.86■□□□□ 0.29
TRIM4Q9C037 AC008687.5-201ENST00000593746 558 ntBASIC16.86■□□□□ 0.29
TRIM4Q9C037 AC024563.2-201ENST00000603282 481 ntBASIC16.86■□□□□ 0.29
TRIM4Q9C037 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM4Q9C037 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TRIM4Q9C037 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM4Q9C037 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM4Q9C037 KRT8P47-201ENST00000604727 1398 ntBASIC16.86■□□□□ 0.29
TRIM4Q9C037 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
TRIM4Q9C037 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRIM4Q9C037 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM4Q9C037 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM4Q9C037 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM4Q9C037 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRIM4Q9C037 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM4Q9C037 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM4Q9C037 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TRIM4Q9C037 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM4Q9C037 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRIM4Q9C037 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM4Q9C037 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM4Q9C037 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM4Q9C037 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM4Q9C037 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM4Q9C037 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM4Q9C037 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM4Q9C037 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM4Q9C037 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM4Q9C037 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM4Q9C037 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM4Q9C037 RPSAP43-201ENST00000402237 625 ntBASIC16.85■□□□□ 0.29
TRIM4Q9C037 GPX1P2-201ENST00000429271 606 ntBASIC16.85■□□□□ 0.29
TRIM4Q9C037 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM4Q9C037 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM4Q9C037 AC244107.1-201ENST00000442033 332 ntBASIC16.85■□□□□ 0.29
TRIM4Q9C037 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM4Q9C037 AC004967.1-201ENST00000453589 447 ntBASIC16.85■□□□□ 0.29
TRIM4Q9C037 SCARNA2-201ENST00000458748 420 ntBASIC16.85■□□□□ 0.29
TRIM4Q9C037 VENTXP7-201ENST00000475503 772 ntBASIC16.85■□□□□ 0.29
TRIM4Q9C037 AC091607.1-201ENST00000490318 1060 ntBASIC16.85■□□□□ 0.29
TRIM4Q9C037 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM4Q9C037 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.85■□□□□ 0.29
TRIM4Q9C037 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.85■□□□□ 0.29
TRIM4Q9C037 AP005901.3-202ENST00000581653 237 ntBASIC16.85■□□□□ 0.29
TRIM4Q9C037 AL356488.2-201ENST00000602755 427 ntBASIC16.85■□□□□ 0.29
TRIM4Q9C037 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM4Q9C037 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM4Q9C037 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRIM4Q9C037 AC079781.4-201ENST00000641908 219 ntBASIC16.85■□□□□ 0.29
TRIM4Q9C037 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
TRIM4Q9C037 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM4Q9C037 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM4Q9C037 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRIM4Q9C037 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TRIM4Q9C037 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TRIM4Q9C037 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM4Q9C037 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM4Q9C037 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
TRIM4Q9C037 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM4Q9C037 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms