Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 ARSEP1-201ENST00000420443 635 ntBASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 AC022494.1-201ENST00000466044 728 ntBASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CTC1Q2NKJ3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 AP000842.3-202ENST00000569238 1080 ntBASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 AC005412.3-201ENST00000580309 715 ntBASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 AL590560.3-201ENST00000623350 461 ntBASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 AC008267.7-201ENST00000624570 1194 ntBASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 CU639417.3-201ENST00000624240 1404 ntBASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTC1Q2NKJ3 AC046158.3-201ENST00000624947 2558 ntBASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.86■□□□□ 0.45
CTC1Q2NKJ3 ATP5G2P4-201ENST00000442175 420 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms