Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AL603756.1-201ENST00000606511 2163 ntBASIC14.97□□□□□ -0.01
GFRA1P56159 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.97□□□□□ -0.01
GFRA1P56159 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.97□□□□□ -0.01
GFRA1P56159 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.97□□□□□ -0.01
GFRA1P56159 PMS2P2-201ENST00000425039 1128 ntBASIC14.97□□□□□ -0.01
GFRA1P56159 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
GFRA1P56159 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
GFRA1P56159 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.97□□□□□ -0.01
GFRA1P56159 AC069335.1-201ENST00000489972 472 ntBASIC14.97□□□□□ -0.01
GFRA1P56159 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
GFRA1P56159 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
GFRA1P56159 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
GFRA1P56159 KRT8P23-201ENST00000560090 1207 ntBASIC14.97□□□□□ -0.01
GFRA1P56159 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.97□□□□□ -0.01
GFRA1P56159 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.97□□□□□ -0.01
GFRA1P56159 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.97□□□□□ -0.01
GFRA1P56159 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.97□□□□□ -0.01
GFRA1P56159 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.97□□□□□ -0.01
GFRA1P56159 AC009093.7-201ENST00000623853 1223 ntBASIC14.97□□□□□ -0.01
GFRA1P56159 AC008267.7-201ENST00000624570 1194 ntBASIC14.97□□□□□ -0.01
GFRA1P56159 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.97□□□□□ -0.01
GFRA1P56159 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.97□□□□□ -0.01
GFRA1P56159 AC084121.4-201ENST00000641598 221 ntBASIC14.97□□□□□ -0.01
GFRA1P56159 AF228730.8-201ENST00000642140 221 ntBASIC14.97□□□□□ -0.01
GFRA1P56159 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
GFRA1P56159 OR6D1P-202ENST00000641007 5290 ntBASIC14.97□□□□□ -0.01
GFRA1P56159 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.97□□□□□ -0.01
GFRA1P56159 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
GFRA1P56159 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.96□□□□□ -0.01
GFRA1P56159 AC012313.1-201ENST00000593393 3059 ntBASIC14.96□□□□□ -0.01
GFRA1P56159 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.96□□□□□ -0.01
GFRA1P56159 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.96□□□□□ -0.01
GFRA1P56159 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GFRA1P56159 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.96□□□□□ -0.01
GFRA1P56159 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GFRA1P56159 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.96□□□□□ -0.01
GFRA1P56159 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.96□□□□□ -0.01
GFRA1P56159 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.96□□□□□ -0.01
GFRA1P56159 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GFRA1P56159 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GFRA1P56159 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GFRA1P56159 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.96□□□□□ -0.01
GFRA1P56159 TSEN15P1-201ENST00000423257 515 ntBASIC14.96□□□□□ -0.01
GFRA1P56159 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.96□□□□□ -0.01
GFRA1P56159 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GFRA1P56159 AC005237.2-201ENST00000434368 219 ntBASIC14.96□□□□□ -0.01
GFRA1P56159 METTL21AP1-201ENST00000438852 635 ntBASIC14.96□□□□□ -0.01
GFRA1P56159 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GFRA1P56159 HLA-J-202ENST00000469281 1241 ntBASIC14.96□□□□□ -0.01
GFRA1P56159 KRT18P34-201ENST00000488218 1270 ntBASIC14.96□□□□□ -0.01
GFRA1P56159 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.96□□□□□ -0.01
GFRA1P56159 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.96□□□□□ -0.01
GFRA1P56159 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.96□□□□□ -0.01
GFRA1P56159 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.96□□□□□ -0.01
GFRA1P56159 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
GFRA1P56159 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.96□□□□□ -0.01
GFRA1P56159 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.96□□□□□ -0.01
GFRA1P56159 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.96□□□□□ -0.01
GFRA1P56159 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.96□□□□□ -0.01
GFRA1P56159 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.96□□□□□ -0.01
GFRA1P56159 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.96□□□□□ -0.01
GFRA1P56159 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
GFRA1P56159 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
GFRA1P56159 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GFRA1P56159 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
GFRA1P56159 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GFRA1P56159 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.96□□□□□ -0.02
GFRA1P56159 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
GFRA1P56159 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
GFRA1P56159 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GFRA1P56159 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
GFRA1P56159 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
GFRA1P56159 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.95□□□□□ -0.02
GFRA1P56159 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
GFRA1P56159 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
GFRA1P56159 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GFRA1P56159 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.95□□□□□ -0.02
GFRA1P56159 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GFRA1P56159 AC006538.1-201ENST00000567905 1585 ntBASIC14.95□□□□□ -0.02
GFRA1P56159 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GFRA1P56159 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms