Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AC026979.3-201ENST00000607315 403 ntBASIC20.13■□□□□ 0.81
COL11A2P13942 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
COL11A2P13942 AL031731.1-201ENST00000642131 2094 ntBASIC20.13■□□□□ 0.81
COL11A2P13942 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL11A2P13942 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL11A2P13942 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.13■□□□□ 0.81
COL11A2P13942 CDC14C-201ENST00000428251 1719 ntBASIC20.13■□□□□ 0.81
COL11A2P13942 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.13■□□□□ 0.81
COL11A2P13942 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
COL11A2P13942 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL11A2P13942 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL11A2P13942 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
COL11A2P13942 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
COL11A2P13942 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
COL11A2P13942 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.13■□□□□ 0.81
COL11A2P13942 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL11A2P13942 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL11A2P13942 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
COL11A2P13942 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
COL11A2P13942 BCYRN1-201ENST00000418539 200 ntBASIC20.13■□□□□ 0.81
COL11A2P13942 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.13■□□□□ 0.81
COL11A2P13942 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC20.13■□□□□ 0.81
COL11A2P13942 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC20.13■□□□□ 0.81
COL11A2P13942 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC20.13■□□□□ 0.81
COL11A2P13942 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL11A2P13942 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL11A2P13942 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL11A2P13942 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL11A2P13942 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
COL11A2P13942 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL11A2P13942 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL11A2P13942 AC092068.3-201ENST00000587894 2016 ntBASIC20.12■□□□□ 0.81
COL11A2P13942 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL11A2P13942 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.12■□□□□ 0.81
COL11A2P13942 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
COL11A2P13942 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL11A2P13942 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL11A2P13942 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
COL11A2P13942 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL11A2P13942 HIST3H2BA-201ENST00000436555 524 ntBASIC20.12■□□□□ 0.81
COL11A2P13942 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
COL11A2P13942 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC20.12■□□□□ 0.81
COL11A2P13942 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL11A2P13942 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL11A2P13942 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC20.12■□□□□ 0.81
COL11A2P13942 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC20.12■□□□□ 0.81
COL11A2P13942 FADS2-205ENST00000517839 469 ntTSL 3 BASIC20.12■□□□□ 0.81
COL11A2P13942 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC20.12■□□□□ 0.81
COL11A2P13942 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC20.12■□□□□ 0.81
COL11A2P13942 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC20.12■□□□□ 0.81
COL11A2P13942 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC20.12■□□□□ 0.81
COL11A2P13942 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL11A2P13942 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
COL11A2P13942 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.12■□□□□ 0.81
COL11A2P13942 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
COL11A2P13942 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL11A2P13942 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
COL11A2P13942 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.12■□□□□ 0.81
COL11A2P13942 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL11A2P13942 AL133338.1-201ENST00000565695 1517 ntBASIC20.11■□□□□ 0.81
COL11A2P13942 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL11A2P13942 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.11■□□□□ 0.81
COL11A2P13942 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL11A2P13942 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
COL11A2P13942 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL11A2P13942 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL11A2P13942 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
COL11A2P13942 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL11A2P13942 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC20.11■□□□□ 0.81
COL11A2P13942 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL11A2P13942 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC20.11■□□□□ 0.81
COL11A2P13942 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC20.11■□□□□ 0.81
COL11A2P13942 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC20.11■□□□□ 0.81
COL11A2P13942 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
COL11A2P13942 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL11A2P13942 GPAA1P2-202ENST00000606848 1787 ntBASIC20.11■□□□□ 0.81
COL11A2P13942 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL11A2P13942 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL11A2P13942 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL11A2P13942 CYP4F24P-201ENST00000586049 1580 ntBASIC20.11■□□□□ 0.81
COL11A2P13942 AL136982.4-201ENST00000437689 1740 ntBASIC20.11■□□□□ 0.81
COL11A2P13942 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC20.11■□□□□ 0.81
COL11A2P13942 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL11A2P13942 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
COL11A2P13942 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.11■□□□□ 0.81
COL11A2P13942 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL11A2P13942 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL11A2P13942 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC20.11■□□□□ 0.81
COL11A2P13942 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.11■□□□□ 0.81
COL11A2P13942 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
COL11A2P13942 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL11A2P13942 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC20.1■□□□□ 0.81
COL11A2P13942 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC20.1■□□□□ 0.81
COL11A2P13942 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
COL11A2P13942 AC099336.1-201ENST00000417053 1171 ntBASIC20.1■□□□□ 0.81
COL11A2P13942 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC20.1■□□□□ 0.81
COL11A2P13942 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC20.1■□□□□ 0.81
COL11A2P13942 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL11A2P13942 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL11A2P13942 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms