Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
EBF1Q9UH73 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.11■□□□□ 0.33
EBF1Q9UH73 AC087641.1-201ENST00000557561 1021 ntBASIC17.11■□□□□ 0.33
EBF1Q9UH73 KRT8P23-201ENST00000560090 1207 ntBASIC17.11■□□□□ 0.33
EBF1Q9UH73 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.11■□□□□ 0.33
EBF1Q9UH73 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EBF1Q9UH73 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
EBF1Q9UH73 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EBF1Q9UH73 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
EBF1Q9UH73 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
EBF1Q9UH73 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EBF1Q9UH73 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
EBF1Q9UH73 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.11■□□□□ 0.33
EBF1Q9UH73 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.11■□□□□ 0.33
EBF1Q9UH73 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
EBF1Q9UH73 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EBF1Q9UH73 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.1■□□□□ 0.33
EBF1Q9UH73 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EBF1Q9UH73 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
EBF1Q9UH73 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.1■□□□□ 0.33
EBF1Q9UH73 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.1■□□□□ 0.33
EBF1Q9UH73 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.1■□□□□ 0.33
EBF1Q9UH73 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EBF1Q9UH73 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
EBF1Q9UH73 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EBF1Q9UH73 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EBF1Q9UH73 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EBF1Q9UH73 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EBF1Q9UH73 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
EBF1Q9UH73 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.1■□□□□ 0.33
EBF1Q9UH73 AL162727.3-201ENST00000635661 2787 ntBASIC17.1■□□□□ 0.33
EBF1Q9UH73 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EBF1Q9UH73 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EBF1Q9UH73 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EBF1Q9UH73 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
EBF1Q9UH73 AC107890.1-201ENST00000422478 521 ntBASIC17.1■□□□□ 0.33
EBF1Q9UH73 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
EBF1Q9UH73 SPCS2P4-201ENST00000436160 681 ntBASIC17.1■□□□□ 0.33
EBF1Q9UH73 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.1■□□□□ 0.33
EBF1Q9UH73 TERF1P3-201ENST00000505638 1227 ntBASIC17.1■□□□□ 0.33
EBF1Q9UH73 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.1■□□□□ 0.33
EBF1Q9UH73 DUX4L17-201ENST00000557360 1267 ntBASIC17.1■□□□□ 0.33
EBF1Q9UH73 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.1■□□□□ 0.33
EBF1Q9UH73 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EBF1Q9UH73 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
EBF1Q9UH73 AC084121.4-201ENST00000641598 221 ntBASIC17.1■□□□□ 0.33
EBF1Q9UH73 AF228730.8-201ENST00000642140 221 ntBASIC17.1■□□□□ 0.33
EBF1Q9UH73 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.1■□□□□ 0.33
EBF1Q9UH73 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EBF1Q9UH73 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EBF1Q9UH73 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.1■□□□□ 0.33
EBF1Q9UH73 AC063926.2-201ENST00000623766 1308 ntBASIC17.1■□□□□ 0.33
EBF1Q9UH73 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EBF1Q9UH73 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EBF1Q9UH73 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EBF1Q9UH73 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
EBF1Q9UH73 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EBF1Q9UH73 UBALD1-205ENST00000590891 2641 ntBASIC17.1■□□□□ 0.33
EBF1Q9UH73 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EBF1Q9UH73 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EBF1Q9UH73 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
EBF1Q9UH73 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.1■□□□□ 0.33
EBF1Q9UH73 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EBF1Q9UH73 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EBF1Q9UH73 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EBF1Q9UH73 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
EBF1Q9UH73 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
EBF1Q9UH73 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
EBF1Q9UH73 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EBF1Q9UH73 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
EBF1Q9UH73 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
EBF1Q9UH73 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
EBF1Q9UH73 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EBF1Q9UH73 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.09■□□□□ 0.33
EBF1Q9UH73 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.09■□□□□ 0.33
EBF1Q9UH73 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.09■□□□□ 0.33
EBF1Q9UH73 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.09■□□□□ 0.33
EBF1Q9UH73 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.09■□□□□ 0.33
EBF1Q9UH73 LINC01225-203ENST00000563550 1244 ntBASIC17.09■□□□□ 0.33
EBF1Q9UH73 AC140878.1-201ENST00000565277 250 ntBASIC17.09■□□□□ 0.33
EBF1Q9UH73 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.09■□□□□ 0.33
EBF1Q9UH73 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.09■□□□□ 0.33
EBF1Q9UH73 AC005412.3-201ENST00000580309 715 ntBASIC17.09■□□□□ 0.33
EBF1Q9UH73 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EBF1Q9UH73 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EBF1Q9UH73 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.09■□□□□ 0.33
EBF1Q9UH73 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.09■□□□□ 0.33
EBF1Q9UH73 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
EBF1Q9UH73 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.09■□□□□ 0.33
EBF1Q9UH73 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.09■□□□□ 0.33
EBF1Q9UH73 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EBF1Q9UH73 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.09■□□□□ 0.33
EBF1Q9UH73 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.09■□□□□ 0.33
EBF1Q9UH73 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
EBF1Q9UH73 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.09■□□□□ 0.33
EBF1Q9UH73 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
EBF1Q9UH73 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.09■□□□□ 0.33
EBF1Q9UH73 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.09■□□□□ 0.33
EBF1Q9UH73 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EBF1Q9UH73 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms