Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC105129.2-201ENST00000559536 390 ntBASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 CU634019.7-201ENST00000624153 1185 ntBASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 FP236241.2-201ENST00000624906 1185 ntBASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 ABBA01031663.1-201ENST00000635630 790 ntBASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 BOLA2P3-201ENST00000404566 256 ntBASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 KRT8P13-201ENST00000463294 1010 ntBASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 FOS-206ENST00000555347 1280 ntTSL 2 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 AC244669.2-201ENST00000612320 853 ntBASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 AC012317.2-201ENST00000623305 2251 ntBASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 AGER-203ENST00000375065 665 ntTSL 2 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 MIR326-201ENST00000362220 95 ntBASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 RARRES2P5-201ENST00000564013 466 ntBASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 MIR6727-201ENST00000620702 65 ntBASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ALMS1Q8TCU4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms