Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN2P57739 SPDYE14P-201ENST00000442619 822 ntBASIC16.53■□□□□ 0.24
CLDN2P57739 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.53■□□□□ 0.24
CLDN2P57739 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN2P57739 AC067863.1-201ENST00000494933 530 ntBASIC16.53■□□□□ 0.24
CLDN2P57739 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN2P57739 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN2P57739 AL512356.2-201ENST00000546955 174 ntBASIC16.53■□□□□ 0.24
CLDN2P57739 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
CLDN2P57739 AP000842.3-202ENST00000569238 1080 ntBASIC16.53■□□□□ 0.24
CLDN2P57739 AC015911.4-201ENST00000588022 1070 ntBASIC16.53■□□□□ 0.24
CLDN2P57739 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN2P57739 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN2P57739 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN2P57739 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN2P57739 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CLDN2P57739 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN2P57739 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN2P57739 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN2P57739 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN2P57739 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN2P57739 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN2P57739 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN2P57739 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN2P57739 AC139713.2-201ENST00000641328 2723 ntBASIC16.53■□□□□ 0.24
CLDN2P57739 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN2P57739 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN2P57739 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN2P57739 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CLDN2P57739 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
CLDN2P57739 LINC00895-201ENST00000629028 1637 ntBASIC16.52■□□□□ 0.24
CLDN2P57739 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN2P57739 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN2P57739 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN2P57739 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.52■□□□□ 0.24
CLDN2P57739 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CLDN2P57739 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.52■□□□□ 0.24
CLDN2P57739 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.52■□□□□ 0.24
CLDN2P57739 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN2P57739 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN2P57739 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.52■□□□□ 0.24
CLDN2P57739 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.52■□□□□ 0.24
CLDN2P57739 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CLDN2P57739 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.52■□□□□ 0.24
CLDN2P57739 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.52■□□□□ 0.24
CLDN2P57739 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.52■□□□□ 0.24
CLDN2P57739 AC051619.7-201ENST00000568314 623 ntBASIC16.52■□□□□ 0.24
CLDN2P57739 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.52■□□□□ 0.24
CLDN2P57739 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.52■□□□□ 0.24
CLDN2P57739 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN2P57739 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.52■□□□□ 0.24
CLDN2P57739 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN2P57739 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.52■□□□□ 0.24
CLDN2P57739 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN2P57739 AC012313.1-201ENST00000593393 3059 ntBASIC16.52■□□□□ 0.23
CLDN2P57739 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.52■□□□□ 0.23
CLDN2P57739 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
CLDN2P57739 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN2P57739 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.52■□□□□ 0.23
CLDN2P57739 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN2P57739 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN2P57739 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN2P57739 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN2P57739 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.52■□□□□ 0.23
CLDN2P57739 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CLDN2P57739 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.52■□□□□ 0.23
CLDN2P57739 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.52■□□□□ 0.23
CLDN2P57739 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN2P57739 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN2P57739 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN2P57739 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN2P57739 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN2P57739 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.51■□□□□ 0.23
CLDN2P57739 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN2P57739 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CLDN2P57739 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
CLDN2P57739 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN2P57739 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN2P57739 TUBB8P12-201ENST00000308911 1335 ntBASIC16.51■□□□□ 0.23
CLDN2P57739 TUBB7P-202ENST00000428444 1305 ntBASIC16.51■□□□□ 0.23
CLDN2P57739 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN2P57739 TUBB8P7-204ENST00000567960 1332 ntBASIC16.51■□□□□ 0.23
CLDN2P57739 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN2P57739 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN2P57739 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN2P57739 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN2P57739 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN2P57739 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CLDN2P57739 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN2P57739 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CLDN2P57739 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN2P57739 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN2P57739 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.51■□□□□ 0.23
CLDN2P57739 AC093214.1-201ENST00000511688 1107 ntBASIC16.51■□□□□ 0.23
CLDN2P57739 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.51■□□□□ 0.23
CLDN2P57739 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN2P57739 AL096865.1-201ENST00000606796 927 ntBASIC16.51■□□□□ 0.23
CLDN2P57739 AC021097.1-201ENST00000607902 574 ntBASIC16.51■□□□□ 0.23
CLDN2P57739 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.51■□□□□ 0.23
CLDN2P57739 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms