Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RB1P06400 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.62■□□□□ 0.41
RB1P06400 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RB1P06400 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.62■□□□□ 0.41
RB1P06400 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.62■□□□□ 0.41
RB1P06400 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RB1P06400 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.62■□□□□ 0.41
RB1P06400 MIR6805-201ENST00000615055 62 ntBASIC17.62■□□□□ 0.41
RB1P06400 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RB1P06400 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RB1P06400 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RB1P06400 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.62■□□□□ 0.41
RB1P06400 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RB1P06400 AL390961.4-201ENST00000623958 2535 ntBASIC17.62■□□□□ 0.41
RB1P06400 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RB1P06400 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RB1P06400 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
RB1P06400 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RB1P06400 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.62■□□□□ 0.41
RB1P06400 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.62■□□□□ 0.41
RB1P06400 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.62■□□□□ 0.41
RB1P06400 AC108860.2-201ENST00000562760 2183 ntBASIC17.62■□□□□ 0.41
RB1P06400 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.61■□□□□ 0.41
RB1P06400 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
RB1P06400 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RB1P06400 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RB1P06400 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.61■□□□□ 0.41
RB1P06400 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.61■□□□□ 0.41
RB1P06400 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RB1P06400 SPDYE19P-201ENST00000338590 713 ntBASIC17.61■□□□□ 0.41
RB1P06400 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RB1P06400 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RB1P06400 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
RB1P06400 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RB1P06400 AC079776.1-201ENST00000401540 1152 ntBASIC17.61■□□□□ 0.41
RB1P06400 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.61■□□□□ 0.41
RB1P06400 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.61■□□□□ 0.41
RB1P06400 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.61■□□□□ 0.41
RB1P06400 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.61■□□□□ 0.41
RB1P06400 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.61■□□□□ 0.41
RB1P06400 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RB1P06400 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.61■□□□□ 0.41
RB1P06400 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.61■□□□□ 0.41
RB1P06400 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RB1P06400 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RB1P06400 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RB1P06400 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RB1P06400 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RB1P06400 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RB1P06400 AL023806.1-201ENST00000603994 1649 ntBASIC17.61■□□□□ 0.41
RB1P06400 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RB1P06400 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RB1P06400 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RB1P06400 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RB1P06400 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RB1P06400 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
RB1P06400 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RB1P06400 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RB1P06400 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RB1P06400 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RB1P06400 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.6■□□□□ 0.41
RB1P06400 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.6■□□□□ 0.41
RB1P06400 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.6■□□□□ 0.41
RB1P06400 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.6■□□□□ 0.41
RB1P06400 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.6■□□□□ 0.41
RB1P06400 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.6■□□□□ 0.41
RB1P06400 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.6■□□□□ 0.41
RB1P06400 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.6■□□□□ 0.41
RB1P06400 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.6■□□□□ 0.41
RB1P06400 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.6■□□□□ 0.41
RB1P06400 AC132938.2-201ENST00000579188 680 ntBASIC17.6■□□□□ 0.41
RB1P06400 CHCHD2P3-201ENST00000603038 451 ntBASIC17.6■□□□□ 0.41
RB1P06400 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.6■□□□□ 0.41
RB1P06400 AL591163.1-201ENST00000641757 987 ntBASIC17.6■□□□□ 0.41
RB1P06400 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RB1P06400 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.6■□□□□ 0.41
RB1P06400 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.6■□□□□ 0.41
RB1P06400 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RB1P06400 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.6■□□□□ 0.41
RB1P06400 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RB1P06400 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.6■□□□□ 0.41
RB1P06400 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RB1P06400 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RB1P06400 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RB1P06400 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RB1P06400 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RB1P06400 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RB1P06400 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RB1P06400 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
RB1P06400 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.59■□□□□ 0.41
RB1P06400 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.59■□□□□ 0.41
RB1P06400 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RB1P06400 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.59■□□□□ 0.41
RB1P06400 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RB1P06400 AC116353.5-201ENST00000638148 1699 ntBASIC17.59■□□□□ 0.41
RB1P06400 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
RB1P06400 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.59■□□□□ 0.41
RB1P06400 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RB1P06400 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RB1P06400 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms