Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC21.56■■□□□ 1.04
SMC4Q9NTJ3 AC087641.1-201ENST00000557561 1021 ntBASIC21.56■■□□□ 1.04
SMC4Q9NTJ3 AC064836.3-201ENST00000607928 673 ntBASIC21.56■■□□□ 1.04
SMC4Q9NTJ3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMC4Q9NTJ3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SMC4Q9NTJ3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC21.56■■□□□ 1.04
SMC4Q9NTJ3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMC4Q9NTJ3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMC4Q9NTJ3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMC4Q9NTJ3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMC4Q9NTJ3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 PC-214ENST00000628663 1470 ntTSL 5 BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 AC006538.1-201ENST00000567905 1585 ntBASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMC4Q9NTJ3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 HCG4-201ENST00000418983 998 ntBASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 AL513480.1-201ENST00000451731 511 ntBASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 AL139011.1-202ENST00000642063 584 ntBASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMC4Q9NTJ3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 ZNF259P1-201ENST00000407656 1365 ntBASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 HLA-J-202ENST00000469281 1241 ntBASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 CD63-210ENST00000550776 870 ntTSL 5 BASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 AC106730.1-201ENST00000566722 1090 ntBASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 AC018845.2-201ENST00000568326 409 ntBASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 SIGLEC29P-201ENST00000599873 1114 ntBASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 AC012569.1-201ENST00000591191 1524 ntBASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMC4Q9NTJ3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms