Protein–RNA interactions for Protein: Q8WUD4

CCDC12, Coiled-coil domain-containing protein 12, humanhuman

Predicted RBP Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12Q8WUD4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 AL513480.1-201ENST00000451731 511 ntBASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 AC023141.13-201ENST00000604991 943 ntBASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 AL645728.2-201ENST00000641974 660 ntBASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC12Q8WUD4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 AC087641.1-201ENST00000557561 1021 ntBASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 MIR4515-201ENST00000584082 81 ntBASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 AC005915.1-201ENST00000624912 2018 ntBASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC12Q8WUD4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC12Q8WUD4 UBALD1-205ENST00000590891 2641 ntBASIC19.39■□□□□ 0.7
CCDC12Q8WUD4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC12Q8WUD4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
CCDC12Q8WUD4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC12Q8WUD4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 AC012569.1-201ENST00000591191 1524 ntBASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 AC006277.1-201ENST00000624348 1610 ntBASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC12Q8WUD4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC12Q8WUD4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC12Q8WUD4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC12Q8WUD4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC12Q8WUD4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC12Q8WUD4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC12Q8WUD4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC12Q8WUD4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC12Q8WUD4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC12Q8WUD4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC12Q8WUD4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC12Q8WUD4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC12Q8WUD4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC12Q8WUD4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC12Q8WUD4 AL391256.1-201ENST00000443260 1855 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms