Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AL023806.1-201ENST00000603994 1649 ntBASIC17.75■□□□□ 0.43
VARS2Q5ST30 AC006277.1-201ENST00000624348 1610 ntBASIC17.75■□□□□ 0.43
VARS2Q5ST30 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARS2Q5ST30 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARS2Q5ST30 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARS2Q5ST30 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.75■□□□□ 0.43
VARS2Q5ST30 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
VARS2Q5ST30 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VARS2Q5ST30 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
VARS2Q5ST30 TUBB3P1-201ENST00000405796 1332 ntBASIC17.74■□□□□ 0.43
VARS2Q5ST30 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
VARS2Q5ST30 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VARS2Q5ST30 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VARS2Q5ST30 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VARS2Q5ST30 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VARS2Q5ST30 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VARS2Q5ST30 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VARS2Q5ST30 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.74■□□□□ 0.43
VARS2Q5ST30 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VARS2Q5ST30 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VARS2Q5ST30 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VARS2Q5ST30 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.74■□□□□ 0.43
VARS2Q5ST30 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.74■□□□□ 0.43
VARS2Q5ST30 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VARS2Q5ST30 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC17.74■□□□□ 0.43
VARS2Q5ST30 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.74■□□□□ 0.43
VARS2Q5ST30 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VARS2Q5ST30 MIR4745-201ENST00000577608 62 ntBASIC17.74■□□□□ 0.43
VARS2Q5ST30 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.74■□□□□ 0.43
VARS2Q5ST30 AL390955.2-201ENST00000603032 514 ntBASIC17.74■□□□□ 0.43
VARS2Q5ST30 AC013467.2-201ENST00000605472 835 ntBASIC17.74■□□□□ 0.43
VARS2Q5ST30 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.74■□□□□ 0.43
VARS2Q5ST30 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
VARS2Q5ST30 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VARS2Q5ST30 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VARS2Q5ST30 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VARS2Q5ST30 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
VARS2Q5ST30 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.74■□□□□ 0.43
VARS2Q5ST30 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VARS2Q5ST30 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VARS2Q5ST30 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VARS2Q5ST30 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.74■□□□□ 0.43
VARS2Q5ST30 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VARS2Q5ST30 AL671710.1-201ENST00000610245 2349 ntBASIC17.73■□□□□ 0.43
VARS2Q5ST30 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VARS2Q5ST30 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VARS2Q5ST30 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VARS2Q5ST30 AC063926.2-201ENST00000623766 1308 ntBASIC17.73■□□□□ 0.43
VARS2Q5ST30 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VARS2Q5ST30 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VARS2Q5ST30 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.73■□□□□ 0.43
VARS2Q5ST30 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
VARS2Q5ST30 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VARS2Q5ST30 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VARS2Q5ST30 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VARS2Q5ST30 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VARS2Q5ST30 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
VARS2Q5ST30 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VARS2Q5ST30 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
VARS2Q5ST30 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VARS2Q5ST30 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
VARS2Q5ST30 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VARS2Q5ST30 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VARS2Q5ST30 AC005034.1-201ENST00000426657 489 ntBASIC17.73■□□□□ 0.43
VARS2Q5ST30 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.73■□□□□ 0.43
VARS2Q5ST30 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.73■□□□□ 0.43
VARS2Q5ST30 ARL4AP4-201ENST00000434170 518 ntBASIC17.73■□□□□ 0.43
VARS2Q5ST30 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.73■□□□□ 0.43
VARS2Q5ST30 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VARS2Q5ST30 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.73■□□□□ 0.43
VARS2Q5ST30 KRT18P34-201ENST00000488218 1270 ntBASIC17.73■□□□□ 0.43
VARS2Q5ST30 AC091917.2-201ENST00000505002 744 ntBASIC17.73■□□□□ 0.43
VARS2Q5ST30 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.73■□□□□ 0.43
VARS2Q5ST30 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.73■□□□□ 0.43
VARS2Q5ST30 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.73■□□□□ 0.43
VARS2Q5ST30 AC009712.1-201ENST00000564938 316 ntBASIC17.73■□□□□ 0.43
VARS2Q5ST30 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VARS2Q5ST30 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.73■□□□□ 0.43
VARS2Q5ST30 AC009948.4-201ENST00000604692 675 ntBASIC17.73■□□□□ 0.43
VARS2Q5ST30 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VARS2Q5ST30 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.73■□□□□ 0.43
VARS2Q5ST30 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.73■□□□□ 0.43
VARS2Q5ST30 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VARS2Q5ST30 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.73■□□□□ 0.43
VARS2Q5ST30 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.73■□□□□ 0.43
VARS2Q5ST30 AC008677.1-201ENST00000519230 1561 ntBASIC17.73■□□□□ 0.43
VARS2Q5ST30 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VARS2Q5ST30 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VARS2Q5ST30 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VARS2Q5ST30 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VARS2Q5ST30 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VARS2Q5ST30 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VARS2Q5ST30 PCDHB17P-201ENST00000539533 2393 ntBASIC17.73■□□□□ 0.43
VARS2Q5ST30 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.73■□□□□ 0.43
VARS2Q5ST30 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VARS2Q5ST30 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARS2Q5ST30 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VARS2Q5ST30 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARS2Q5ST30 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
VARS2Q5ST30 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms