Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
ALFQ53S48 RPSAP43-201ENST00000402237 625 ntBASIC17.27■□□□□ 0.36
ALFQ53S48 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.27■□□□□ 0.36
ALFQ53S48 GPX1P2-201ENST00000429271 606 ntBASIC17.27■□□□□ 0.36
ALFQ53S48 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ALFQ53S48 AC112482.1-201ENST00000492080 688 ntBASIC17.27■□□□□ 0.36
ALFQ53S48 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.27■□□□□ 0.36
ALFQ53S48 AP002472.1-201ENST00000577490 586 ntBASIC17.27■□□□□ 0.36
ALFQ53S48 AL078644.1-201ENST00000609881 752 ntBASIC17.27■□□□□ 0.36
ALFQ53S48 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ALFQ53S48 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALFQ53S48 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.27■□□□□ 0.36
ALFQ53S48 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ALFQ53S48 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ALFQ53S48 AC078925.2-201ENST00000624013 1973 ntBASIC17.27■□□□□ 0.36
ALFQ53S48 SNX33P1-201ENST00000592116 1762 ntBASIC17.27■□□□□ 0.35
ALFQ53S48 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ALFQ53S48 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ALFQ53S48 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ALFQ53S48 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.27■□□□□ 0.35
ALFQ53S48 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.27■□□□□ 0.35
ALFQ53S48 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.27■□□□□ 0.35
ALFQ53S48 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ALFQ53S48 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
ALFQ53S48 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ALFQ53S48 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ALFQ53S48 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ALFQ53S48 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ALFQ53S48 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.27■□□□□ 0.35
ALFQ53S48 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.26■□□□□ 0.35
ALFQ53S48 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALFQ53S48 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ALFQ53S48 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALFQ53S48 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALFQ53S48 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALFQ53S48 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
ALFQ53S48 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALFQ53S48 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALFQ53S48 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALFQ53S48 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALFQ53S48 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
ALFQ53S48 KRT18P13-201ENST00000400056 1290 ntBASIC17.26■□□□□ 0.35
ALFQ53S48 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.26■□□□□ 0.35
ALFQ53S48 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.26■□□□□ 0.35
ALFQ53S48 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.26■□□□□ 0.35
ALFQ53S48 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.26■□□□□ 0.35
ALFQ53S48 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.26■□□□□ 0.35
ALFQ53S48 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.26■□□□□ 0.35
ALFQ53S48 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.26■□□□□ 0.35
ALFQ53S48 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.26■□□□□ 0.35
ALFQ53S48 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALFQ53S48 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALFQ53S48 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALFQ53S48 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALFQ53S48 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.26■□□□□ 0.35
ALFQ53S48 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.26■□□□□ 0.35
ALFQ53S48 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALFQ53S48 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALFQ53S48 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.26■□□□□ 0.35
ALFQ53S48 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALFQ53S48 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ALFQ53S48 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ALFQ53S48 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALFQ53S48 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALFQ53S48 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALFQ53S48 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.25■□□□□ 0.35
ALFQ53S48 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALFQ53S48 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ALFQ53S48 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALFQ53S48 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALFQ53S48 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALFQ53S48 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALFQ53S48 AL603756.1-201ENST00000606511 2163 ntBASIC17.25■□□□□ 0.35
ALFQ53S48 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
ALFQ53S48 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.25■□□□□ 0.35
ALFQ53S48 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ALFQ53S48 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALFQ53S48 AD000864.1-201ENST00000624076 2295 ntBASIC17.25■□□□□ 0.35
ALFQ53S48 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALFQ53S48 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALFQ53S48 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALFQ53S48 UPF3AP3-201ENST00000420996 769 ntBASIC17.25■□□□□ 0.35
ALFQ53S48 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.25■□□□□ 0.35
ALFQ53S48 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALFQ53S48 AC140658.5-201ENST00000438532 169 ntBASIC17.25■□□□□ 0.35
ALFQ53S48 DNAJB3-201ENST00000446806 729 ntBASIC17.25■□□□□ 0.35
ALFQ53S48 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.25■□□□□ 0.35
ALFQ53S48 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
ALFQ53S48 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.25■□□□□ 0.35
ALFQ53S48 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ALFQ53S48 AC091812.2-201ENST00000619081 385 ntBASIC17.25■□□□□ 0.35
ALFQ53S48 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.25■□□□□ 0.35
ALFQ53S48 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ALFQ53S48 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALFQ53S48 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.25■□□□□ 0.35
ALFQ53S48 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.25■□□□□ 0.35
ALFQ53S48 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.25■□□□□ 0.35
ALFQ53S48 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALFQ53S48 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALFQ53S48 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms