Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rc3h1Q4VGL6 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Gm12928-201ENSMUST00000117115 573 ntBASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Gm5356-201ENSMUST00000093326 615 ntBASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rc3h1Q4VGL6 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Gm13829-201ENSMUST00000119600 138 ntBASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Gm5161-201ENSMUST00000075243 853 ntBASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Rc3h1Q4VGL6 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Gm6266-201ENSMUST00000203844 806 ntBASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rc3h1Q4VGL6 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms