Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TSPAN3O60637 PCDHB17P-201ENST00000539533 2393 ntBASIC17.32■□□□□ 0.36
TSPAN3O60637 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.32■□□□□ 0.36
TSPAN3O60637 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TSPAN3O60637 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TSPAN3O60637 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TSPAN3O60637 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TSPAN3O60637 AL121761.2-201ENST00000598007 1648 ntBASIC17.32■□□□□ 0.36
TSPAN3O60637 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.32■□□□□ 0.36
TSPAN3O60637 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TSPAN3O60637 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TSPAN3O60637 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.31■□□□□ 0.36
TSPAN3O60637 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.31■□□□□ 0.36
TSPAN3O60637 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.31■□□□□ 0.36
TSPAN3O60637 AL009183.1-201ENST00000603760 355 ntBASIC17.31■□□□□ 0.36
TSPAN3O60637 AP001350.2-201ENST00000625104 1094 ntBASIC17.31■□□□□ 0.36
TSPAN3O60637 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.31■□□□□ 0.36
TSPAN3O60637 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TSPAN3O60637 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TSPAN3O60637 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TSPAN3O60637 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.31■□□□□ 0.36
TSPAN3O60637 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN3O60637 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN3O60637 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN3O60637 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN3O60637 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TSPAN3O60637 TUBB8P12-201ENST00000308911 1335 ntBASIC17.3■□□□□ 0.36
TSPAN3O60637 TUBB7P-202ENST00000428444 1305 ntBASIC17.3■□□□□ 0.36
TSPAN3O60637 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TSPAN3O60637 TUBB8P7-204ENST00000567960 1332 ntBASIC17.3■□□□□ 0.36
TSPAN3O60637 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN3O60637 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN3O60637 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN3O60637 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN3O60637 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN3O60637 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN3O60637 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.3■□□□□ 0.36
TSPAN3O60637 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN3O60637 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TSPAN3O60637 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN3O60637 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.3■□□□□ 0.36
TSPAN3O60637 AL355306.1-201ENST00000415580 579 ntBASIC17.3■□□□□ 0.36
TSPAN3O60637 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.3■□□□□ 0.36
TSPAN3O60637 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.3■□□□□ 0.36
TSPAN3O60637 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.3■□□□□ 0.36
TSPAN3O60637 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TSPAN3O60637 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.3■□□□□ 0.36
TSPAN3O60637 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.3■□□□□ 0.36
TSPAN3O60637 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TSPAN3O60637 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.3■□□□□ 0.36
TSPAN3O60637 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.3■□□□□ 0.36
TSPAN3O60637 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN3O60637 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.3■□□□□ 0.36
TSPAN3O60637 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.3■□□□□ 0.36
TSPAN3O60637 AL031055.1-201ENST00000606362 631 ntBASIC17.3■□□□□ 0.36
TSPAN3O60637 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.3■□□□□ 0.36
TSPAN3O60637 AC105339.1-204ENST00000636249 355 ntBASIC17.3■□□□□ 0.36
TSPAN3O60637 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TSPAN3O60637 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.3■□□□□ 0.36
TSPAN3O60637 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN3O60637 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN3O60637 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN3O60637 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.3■□□□□ 0.36
TSPAN3O60637 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN3O60637 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSPAN3O60637 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TSPAN3O60637 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN3O60637 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN3O60637 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN3O60637 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN3O60637 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TSPAN3O60637 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN3O60637 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms