Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 PMS2P4-201ENST00000412466 1052 ntBASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 AC005237.2-201ENST00000434368 219 ntBASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 AL592309.1-201ENST00000443127 649 ntBASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 AC023141.5-201ENST00000458585 616 ntBASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 AC079140.1-201ENST00000508039 487 ntBASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 MIR3909-201ENST00000579518 119 ntBASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 MIR4492-201ENST00000581627 80 ntBASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 PCDHB18P-201ENST00000524813 2368 ntBASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00588Q9Y4M8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 AC243562.1-201ENST00000560672 389 ntBASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 AC004449.1-201ENST00000564240 433 ntBASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 WASH6P-202ENST00000359512 1437 ntBASIC11.5□□□□□ -0.57
LINC00588Q9Y4M8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms