Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 AL589739.1-201ENST00000607720 493 ntBASIC17.12■□□□□ 0.33
NOTCH4Q99466 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.12■□□□□ 0.33
NOTCH4Q99466 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.12■□□□□ 0.33
NOTCH4Q99466 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NOTCH4Q99466 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NOTCH4Q99466 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
NOTCH4Q99466 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NOTCH4Q99466 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.12■□□□□ 0.33
NOTCH4Q99466 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NOTCH4Q99466 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.11■□□□□ 0.33
NOTCH4Q99466 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NOTCH4Q99466 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NOTCH4Q99466 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NOTCH4Q99466 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NOTCH4Q99466 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NOTCH4Q99466 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NOTCH4Q99466 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NOTCH4Q99466 AC098859.1-201ENST00000502915 1238 ntBASIC17.11■□□□□ 0.33
NOTCH4Q99466 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.11■□□□□ 0.33
NOTCH4Q99466 IGHV3-71-201ENST00000523324 359 ntBASIC17.11■□□□□ 0.33
NOTCH4Q99466 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NOTCH4Q99466 CHCHD2P3-201ENST00000603038 451 ntBASIC17.11■□□□□ 0.33
NOTCH4Q99466 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.11■□□□□ 0.33
NOTCH4Q99466 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NOTCH4Q99466 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NOTCH4Q99466 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.11■□□□□ 0.33
NOTCH4Q99466 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NOTCH4Q99466 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NOTCH4Q99466 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.11■□□□□ 0.33
NOTCH4Q99466 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.11■□□□□ 0.33
NOTCH4Q99466 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.11■□□□□ 0.33
NOTCH4Q99466 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.11■□□□□ 0.33
NOTCH4Q99466 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
NOTCH4Q99466 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NOTCH4Q99466 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NOTCH4Q99466 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.11■□□□□ 0.33
NOTCH4Q99466 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NOTCH4Q99466 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.11■□□□□ 0.33
NOTCH4Q99466 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.11■□□□□ 0.33
NOTCH4Q99466 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
NOTCH4Q99466 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.11■□□□□ 0.33
NOTCH4Q99466 AC140912.1-201ENST00000577171 1054 ntBASIC17.11■□□□□ 0.33
NOTCH4Q99466 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.11■□□□□ 0.33
NOTCH4Q99466 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.11■□□□□ 0.33
NOTCH4Q99466 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
NOTCH4Q99466 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NOTCH4Q99466 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NOTCH4Q99466 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
NOTCH4Q99466 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NOTCH4Q99466 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.11■□□□□ 0.33
NOTCH4Q99466 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NOTCH4Q99466 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NOTCH4Q99466 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NOTCH4Q99466 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NOTCH4Q99466 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NOTCH4Q99466 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NOTCH4Q99466 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NOTCH4Q99466 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.1■□□□□ 0.33
NOTCH4Q99466 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.1■□□□□ 0.33
NOTCH4Q99466 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NOTCH4Q99466 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.1■□□□□ 0.33
NOTCH4Q99466 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.1■□□□□ 0.33
NOTCH4Q99466 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.1■□□□□ 0.33
NOTCH4Q99466 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
NOTCH4Q99466 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.1■□□□□ 0.33
NOTCH4Q99466 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NOTCH4Q99466 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NOTCH4Q99466 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.1■□□□□ 0.33
NOTCH4Q99466 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
NOTCH4Q99466 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NOTCH4Q99466 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.1■□□□□ 0.33
NOTCH4Q99466 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NOTCH4Q99466 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NOTCH4Q99466 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NOTCH4Q99466 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NOTCH4Q99466 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.1■□□□□ 0.33
NOTCH4Q99466 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NOTCH4Q99466 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.09■□□□□ 0.33
NOTCH4Q99466 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.09■□□□□ 0.33
NOTCH4Q99466 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.09■□□□□ 0.33
NOTCH4Q99466 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.09■□□□□ 0.33
NOTCH4Q99466 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.09■□□□□ 0.33
NOTCH4Q99466 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.09■□□□□ 0.33
NOTCH4Q99466 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NOTCH4Q99466 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.09■□□□□ 0.33
NOTCH4Q99466 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.09■□□□□ 0.33
NOTCH4Q99466 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NOTCH4Q99466 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NOTCH4Q99466 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.09■□□□□ 0.33
NOTCH4Q99466 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
NOTCH4Q99466 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NOTCH4Q99466 BTBD7P1-201ENST00000447253 1453 ntBASIC17.09■□□□□ 0.33
NOTCH4Q99466 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NOTCH4Q99466 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.09■□□□□ 0.33
NOTCH4Q99466 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NOTCH4Q99466 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.09■□□□□ 0.33
NOTCH4Q99466 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NOTCH4Q99466 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NOTCH4Q99466 GK-202ENST00000378941 458 ntTSL 3 BASIC17.09■□□□□ 0.33
NOTCH4Q99466 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms