Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCC2Q8TAQ2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 TOP3BP1-201ENST00000420768 1380 ntBASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 AL591424.1-201ENST00000442569 1213 ntBASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 FAM197Y3-203ENST00000618346 717 ntBASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 AC004790.2-201ENST00000623588 572 ntBASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 AL139011.1-202ENST00000642063 584 ntBASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCC2Q8TAQ2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 AC006538.1-201ENST00000567905 1585 ntBASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 AC087163.2-201ENST00000457299 853 ntBASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 GGTLC5P-201ENST00000617623 998 ntBASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 AC006449.5-201ENST00000610658 2098 ntBASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 PMS2P7-201ENST00000506558 1336 ntBASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 AC002310.6-201ENST00000624451 1377 ntBASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.7■□□□□ 0.74
SMARCC2Q8TAQ2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.69■□□□□ 0.74
SMARCC2Q8TAQ2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCC2Q8TAQ2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCC2Q8TAQ2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.69■□□□□ 0.74
SMARCC2Q8TAQ2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
SMARCC2Q8TAQ2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.69■□□□□ 0.74
SMARCC2Q8TAQ2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
SMARCC2Q8TAQ2 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCC2Q8TAQ2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
SMARCC2Q8TAQ2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCC2Q8TAQ2 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCC2Q8TAQ2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SMARCC2Q8TAQ2 CRYGEP-201ENST00000412192 528 ntBASIC19.69■□□□□ 0.74
SMARCC2Q8TAQ2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.69■□□□□ 0.74
SMARCC2Q8TAQ2 KRT18P3-201ENST00000451602 1288 ntBASIC19.69■□□□□ 0.74
SMARCC2Q8TAQ2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCC2Q8TAQ2 MIR4492-201ENST00000581627 80 ntBASIC19.69■□□□□ 0.74
SMARCC2Q8TAQ2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.69■□□□□ 0.74
SMARCC2Q8TAQ2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCC2Q8TAQ2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms