Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 AC093525.9-201ENST00000624961 1746 ntBASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 AL122018.1-201ENST00000446607 2310 ntBASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.31■□□□□ 0.04
CROCCP3Q8IVE0 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 KRT18P29-201ENST00000397031 1267 ntBASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 AL596087.1-201ENST00000400979 1969 ntBASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 KRT18P65-201ENST00000439811 1286 ntBASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 AC113404.2-201ENST00000507884 177 ntBASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 CICP24-201ENST00000605464 2705 ntBASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 AL139327.4-201ENST00000612362 153 ntBASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 AC006486.2-201ENST00000624246 2199 ntBASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.3■□□□□ 0.04
CROCCP3Q8IVE0 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms