Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 DOC2GP-204ENST00000639052 2548 ntBASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 AC025580.3-201ENST00000617932 1424 ntBASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 FLJ38576-201ENST00000623820 2459 ntBASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 KRT19P2-202ENST00000557173 1012 ntBASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 AL596257.1-201ENST00000641463 2694 ntBASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 FRMD8P1-201ENST00000440433 1524 ntBASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFWD3Q6PCD5 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 AC129492.6-201ENST00000611383 1305 ntBASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 LINC02199-201ENST00000506655 2702 ntBASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 AL513480.1-201ENST00000451731 511 ntBASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 AC006538.3-201ENST00000612495 578 ntBASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms